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Sequence Set Browser

 

AUNV00000000.1 Comamonadaceae bacterium JGI 0001003-E14

Master
# of Contigs: 52
# of Proteins: 0
Total length: 113,075 bp
BioProject: PRJNA176054
BioSample: SAMN02441469
Keywords: WGS
Organism: Comamonadaceae bacterium JGI 0001003-E14show lineagehide lineage
Biosource:
/mol_type = genomic
/note = single cell isolate
/strain = JGI 0001003-E14
WGS: AUNV01000001:AUNV01000052
Submission:
Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA – show 17 authorshide authors
Tringe,S., Huntemann,M., Han,J., Chen,A., Kyrpides,N., Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X., Woyke,T., DOE Joint Genome Institute

The Comamonadaceae bacterium JGI 0001003-E14 whole genome shotgun (WGS) project has the project accession AUNV00000000. This version of the project (01) has the accession number AUNV01000000, and consists of sequences AUNV01000001-AUNV01000052.

URL -- http://www.jgi.doe.gov JGI Project ID: 1007761 Source DNA and Organism available from Susannah Tringe (sgtringe@lbl.gov) Source DNA available from Susannah Tringe (sgtringe@lbl.gov) Organism available from Susannah Tringe (sgtringe@lbl.gov) Contacts: Susannah Tringe (sgtringe@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Full annotations are available from IMG.

##MIGS-Data-START##
assembly : Velvet v. 1.1.04; ALLPATHS v. R37654
investigation_type : bacteria_archaea
project_name : Comamonadaceae bacterium JGI 0001003-E14
sequencing_meth : WGS
GOLD Stamp ID : Gi22271
Gram Staining : Gram-
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal : Improved High-Quality Draft
Current Finishing Status : Improved High-Quality Draft
Assembly Method : Velvet v. 1.1.04; ALLPATHS v. R37654
Single-cell Amplification : Yes
Genome Coverage : Unknown
Sequencing Technology : Illumina HiSeq 2000
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AUNV01.1.gbff.gz 53.6 kb
FASTA:AUNV01.1.fsa_nt.gz 35.7 kb
ASN.1:AUNV01.1.bbs.gz 33.8 kb