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Sequence Set Browser

 

AUMI00000000.1 Anaeroarcus burkinensis DSM 6283

Master
# of Contigs: 21
# of Proteins: 0
# of Scaffolds: 1
Total length: 3,337,838 bp
BioProject: PRJNA188816
BioSample: SAMN02441147
Keywords: WGS
Organism: Anaeroarcus burkinensis DSM 6283show lineagehide lineage
Biosource:
/culture_collection = DSM:6283
/mol_type = genomic
/strain = DSM 6283
WGS: AUMI01000001:AUMI01000021
Scaffolds: KE387170:KE387170
1 scaffold, total length is 722,679 bases
Submission:
Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA – show 16 authorshide authors
Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X., Woyke,T., DOE Joint Genome Institute

The Anaeroarcus burkinensis DSM 6283 whole genome shotgun (WGS) project has the project accession AUMI00000000. This version of the project (01) has the accession number AUMI01000000, and consists of sequences AUMI01000001-AUMI01000021.

URL -- http://www.jgi.doe.gov JGI Project ID: 1013936 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Nikos Kyrpides (nckyrpides@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Full annotations are available from IMG.

##MIGS-Data-START##
environment : Soil
investigation_type : bacteria_archaea
isol_growth_condt : 10555370
lat_lon : 12.0334 -4.400001
project_name : Anaeroarcus burkinensis DSM 6283
sequencing_meth : WGS
ref_biomaterial : DSM 6283, ATCC 51455
rel_to_oxygen : Anaerobe
finishing_strategy : Level 1: Standard Draft
trophic_level : Chemoorganotroph
GOLD Stamp ID : Gi11133
Type Strain : Yes
Funding Program : DOE-CSP 2012
Isolation Site : Rice field soil
Cell Shape : Curved-shaped
Motility : Motile
Sporulation : Nonsporulating
Gram Staining : Gram-
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal : Improved High-Quality Draft
Current Finishing Status : Improved High-Quality Draft
Assembly Method : Unknown program v. before 2013-03-28
Genome Coverage : Unknown
Sequencing Technology : Illumina HiSeq 2000
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AUMI01.1.gbff.gz 1.4 Mb
FASTA:AUMI01.1.fsa_nt.gz 1010.3 kb
ASN.1:AUMI01.1.bbs.gz 809.8 kb