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Sequence Set Browser

 

AORR00000000.1 Puccinia striiformis f. sp. tritici PST21

Master
# of Contigs: 43,101
# of Proteins: 0
Total length: 73,047,457 bp
BioProject: PRJNA181959
BioSample: SAMN01818051
Keywords: WGS
Organism: Puccinia striiformis f. sp. tritici PST21show lineagehide lineage
Biosource:
/collection_date = 1980
/country = USA
/forma_specialis = tritici
/host = triticale
/isolation_source = leaves
/mol_type = genomic
/note = pathogen of stripe rust in wheat
/strain = PST21
WGS: AORR01000001:AORR01043101
Reference:
Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors : BMC Genomics 14 (1), 270 (2013) – show 9 authorshide authors
Cantu,D., Segovia,V., Maclean,D., Bayles,R., Chen,X., Kamoun,S., Dubcovsky,J., Saunders,D.G., Uauy,C.
Submission:
Submitted (06-FEB-2013) Viticulture and Enology, University of California, Davis, One Shields Ave, Davis, CA 95616, USA – show 9 authorshide authors
Cantu,D., Segovia,V., MacLean,D., Bayles,R., Chen,X., Kamoun,S., Dubcovsky,J., Saunders,D.G.O., Uauy,C.

The Puccinia striiformis f. sp. tritici PST21 whole genome shotgun (WGS) project has the project accession AORR00000000. This version of the project (01) has the accession number AORR01000000, and consists of sequences AORR01000001-AORR01043101.

##Genome-Assembly-Data-START##
Assembly Method : CLC Genomic Workbench v. 4.0
Assembly Name : PST21_v01
Genome Coverage : 62.0x
Sequencing Technology : Illumina HiSeq
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AORR01.1.gbff.gz 32.1 Mb
FASTA:AORR01.1.fsa_nt.gz 22.2 Mb
ASN.1:AORR01.1.bbs.gz 18.5 Mb
History
Minor Version Create Date
1 03/01/2013
5 11/13/2017