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Sequence Set Browser

 

AORQ00000000.1 Puccinia striiformis f. sp. tritici PST43

Master
# of Contigs: 49,546
# of Proteins: 0
Total length: 70,673,865 bp
BioProject: PRJNA181957
BioSample: SAMN01818050
Keywords: WGS
Organism: Puccinia striiformis f. sp. tritici PST43show lineagehide lineage
Biosource:
/collection_date = 1990
/country = USA
/forma_specialis = tritici
/host = Triticum aestivum
/isolation_source = wheat leaves
/mol_type = genomic
/note = pathogen of stripe rust in wheat
/strain = PST43
WGS: AORQ01000001:AORQ01049546
Reference:
Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors : BMC Genomics 14 (1), 270 (2013) – show 9 authorshide authors
Cantu,D., Segovia,V., Maclean,D., Bayles,R., Chen,X., Kamoun,S., Dubcovsky,J., Saunders,D.G., Uauy,C.
Submission:
Submitted (06-FEB-2013) Viticulture and Enology, University of California, Davis, One Shields Ave, Davis, CA 95616, USA – show 9 authorshide authors
Cantu,D., Segovia,V., MacLean,D., Bayles,R., Chen,X., Kamoun,S., Dubcovsky,J., Saunders,D.G.O., Uauy,C.

The Puccinia striiformis f. sp. tritici PST43 whole genome shotgun (WGS) project has the project accession AORQ00000000. This version of the project (01) has the accession number AORQ01000000, and consists of sequences AORQ01000001-AORQ01049546.

##Genome-Assembly-Data-START##
Assembly Method : CLC Genomic Workbech v. 4.0
Assembly Name : PST43_v01
Genome Coverage : 63.0x
Sequencing Technology : Illumina HiSeq
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AORQ01.1.gbff.gz 31.5 Mb
FASTA:AORQ01.1.fsa_nt.gz 21.6 Mb
ASN.1:AORQ01.1.bbs.gz 18.3 Mb
History
Minor Version Create Date
1 03/01/2013
5 11/13/2017