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Sequence Set Browser

 

ANEI00000000.1 Streptococcus agalactiae STIR-CD-07

Master
# of Contigs: 63
# of Proteins: 1,710
Total length: 1,795,552 bp
BioProject: PRJNA86349
BioSample: SAMN00993457
Keywords: WGS
Annotation: Contigs
Organism: Streptococcus agalactiae STIR-CD-07show lineagehide lineage
Biosource:
/host = tilapia
/mol_type = genomic
/strain = STIR-CD-07
WGS: ANEI01000001:ANEI01000063
Submission:
Submitted (17-OCT-2012) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA – show 9 authorshide authors
Delannoy,C., Zadoks,R.N., Richards,V.P., Durkin,S.A.S., Kim,M., Pavinski Bitar,P.D., Stanhope,M.J., Town,C.D., Venter,J.C.

The Streptococcus agalactiae STIR-CD-07 whole genome shotgun (WGS) project has the project accession ANEI00000000. This version of the project (01) has the accession number ANEI01000000, and consists of sequences ANEI01000001-ANEI01000063.

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

##Genome-Assembly-Data-START##
Assembly Method : Celera v. 6.1
Genome Coverage : 100.15x
Sequencing Technology : Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider : NCBI
Annotation Date : 06/11/2013 12:05:46
Annotation Pipeline : NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method : Best-placed reference protein set; GeneMarkS+
Annotation Software revision : 2.0 (rev. 402362)
Features Annotated : Gene; CDS; rRNA; tRNA; repeat_region
Genes : 1,834
CDS : 1,710
Pseudo Genes : 94
rRNAs : 5 ( 5S, 16S, 23S )
tRNAs : 25
Frameshifted Genes : 56
##Genome-Annotation-Data-END##
Contigs
Proteins
Download
GenBank:ANEI01.1.gbff.gz 1.3 Mb
FASTA:ANEI01.1.fsa_nt.gz 544.5 kb
ASN.1:ANEI01.1.bbs.gz 1.1 Mb