Sign in to NCBI
skip to main content

Sequence Set Browser

 

ALPL00000000.1 Prochlorococcus sp. W5

Master
# of Contigs: 92
# of Proteins: 0
Total length: 99,467 bp
BioProject: PRJNA169509
BioSample: SAMN02470473
Keywords: WGS
Organism: Prochlorococcus sp. W5show lineagehide lineage
Biosource:
/clone = W5
/country = Pacific Ocean
/environmental_sample
/isolation_source = 15m depth in Pacific Ocean
/lat_lon = 7.5167 S 167.005 W
/mol_type = genomic
/note = single cell amplified genome
WGS: ALPL01000001:ALPL01000092
Reference:
Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis : ISME J (2012) In press – show 10 authorshide authors
Malmstrom,R.R., Rodrigue,S., Huang,K.H., Kelly,L., Kern,S.E., Thompson,A., Roggensack,S., Berube,P.M., Henn,M.R., Chisholm,S.W.
Submission:
Submitted (27-JUN-2012) Massachusetts Institute of Technology, 15 Vassar St, Cambridge, MA 02139, USA – show 10 authorshide authors
Malmstrom,R.R., Rodrigue,S., Huang,K.H., Kelly,L., Kern,S.E., Thompson,A., Roggensack,S., Berube,P.M., Henn,M., Chisholm,S.W.

The Prochlorococcus sp. W5 whole genome shotgun (WGS) project has the project accession ALPL00000000. This version of the project (01) has the accession number ALPL01000000, and consists of sequences ALPL01000001-ALPL01000092.

##Genome-Assembly-Data-START##
Assembly Method : Newbler v. 2.3
Assembly Name : ProW5_v1.0
Single-cell Amplification : MDA
Genome Coverage : 10.0x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:ALPL01.1.gbff.gz 49.2 kb
FASTA:ALPL01.1.fsa_nt.gz 31.4 kb
ASN.1:ALPL01.1.bbs.gz 27 kb