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Sequence Set Browser

 

ALHH00000000.1 Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 4-1

Master
# of Contigs: 86
# of Proteins: 4,499
Total length: 4,717,036 bp
BioProject: PRJNA62805
BioSample: SAMN01041124
Keywords: WGS
Annotation: Contigs
Organism: Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 4-1show lineagehide lineage
Biosource:
/collection_date = 23-Sep-2010
/isolation_source = environmental swab
/mol_type = genomic
/serovar = Enteritidis
/strain = 642044 4-1
/sub_species = enterica
WGS: ALHH01000001:ALHH01000086
Reference:
On the Evolutionary History, Population Genetics and Diversity among Isolates of Salmonella Enteritidis PFGE Pattern JEGX01.0004 : PLoS ONE 8 (1), E55254 (2013) – show 13 authorshide authors
Allard,M.W., Luo,Y., Strain,E., Pettengill,J., Timme,R., Wang,C., Li,C., Keys,C.E., Zheng,J., Stones,R., Wilson,M.R., Musser,S.M., Brown,E.W.
Submission:
Submitted (25-MAY-2012) Center for Food Safety and Applied Nutrition, United States Food and Drug Administration, 5100 Paint Branch Parkway, College Park, MD 20740, USA – Strain,E.A., Brown,E., Allard,M.W., Luo,Y., Timme,R.

The Salmonella enterica subsp. enterica serovar Enteritidis str. 642044 4-1 whole genome shotgun (WGS) project has the project accession ALHH00000000. This version of the project (01) has the accession number ALHH01000000, and consists of sequences ALHH01000001-ALHH01000086.

Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation. Bacterial culture available from Dwayne Roberson, FDA College Park Campus, 5100 Paint Branch Parkway, College Park, MD 20740.

##Genome-Assembly-Data-START##
Assembly Method : Newbler v. 2.6
Genome Coverage : 18.2x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ALHH01.1.gbff.gz 3.2 Mb
FASTA:ALHH01.1.fsa_nt.gz 1.4 Mb
ASN.1:ALHH01.1.bbs.gz 2.5 Mb