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Sequence Set Browser

 

AFTD00000000.1 Cricetulus griseus

Master
# of Contigs: 265,786
# of Proteins: 24,238
# of Scaffolds/Chrs: 109,151
Total length: 2,318,115,958 bp
BioProject: PRJNA69991
BioSample: SAMN02981352
Keywords: WGS
Annotation: Scaffolds
Organism: Cricetulus griseusshow lineagehide lineage
Biosource:
/cell_line = CHO-K1
/mol_type = genomic
WGS: AFTD01000001:AFTD01265786
Scaffolds: JH000001:JH109151
109,151 scaffolds, 24,238 proteins, total length is 2,399,770,464 bases
Reference:
The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line : Nat. Biotechnol. 29 (8), 735-741 (2011) – show 23 authorshide authors
Xu,X., Nagarajan,H., Lewis,N.E., Pan,S., Cai,Z., Liu,X., Chen,W., Xie,M., Wang,W., Hammond,S., Andersen,M.R., Neff,N., Passarelli,B., Koh,W., Fan,H.C., Wang,J., Gui,Y., Lee,K.H., Betenbaugh,M.J., Quake,S.R., Famili,I., Palsson,B.O., Wang,J.
Submission:
Submitted (02-AUG-2011) Beijing Genomics Institute in Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen, China – show 23 authorshide authors
Xu,X., Nagarajan,H., Lewis,N.E., Pan,S., Cai,Z., Liu,X., Chen,W., Xie,M., Wang,W., Hammond,S., Andersen,M.R., Neff,N., Passarelli,B., Koh,W., Fan,C.H., Wang,J., Gui,Y., Lee,K.H., Betenbaugh,M.J., Quake,S.R., Famili,I., Palsson,B.O., Wang,J.

The Cricetulus griseus whole genome shotgun (WGS) project has the project accession AFTD00000000. This version of the project (01) has the accession number AFTD01000000, and consists of sequences AFTD01000001-AFTD01265786.

Source of DNA is available from ATCC Catalog No. CCL-61.

##Genome-Assembly-Data-START##
Assembly Method : SOAPdenovo v. 1.05
Assembly Name : CriGri_1.0
Genome Coverage : 130x
Sequencing Technology : Illumina GA IIx
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AFTD01.1.gbff.gz 208.9 Mb
 AFTD01.2.gbff.gz 208.6 Mb
 AFTD01.3.gbff.gz 208.5 Mb
 AFTD01.4.gbff.gz 208.7 Mb
 AFTD01.5.gbff.gz 142.7 Mb
FASTA:AFTD01.1.fsa_nt.gz 144.4 Mb
 AFTD01.2.fsa_nt.gz 144.3 Mb
 AFTD01.3.fsa_nt.gz 144.2 Mb
 AFTD01.4.fsa_nt.gz 144.1 Mb
 AFTD01.5.fsa_nt.gz 96.3 Mb
ASN.1:AFTD01.1.bbs.gz 114.8 Mb
 AFTD01.2.bbs.gz 114.7 Mb
 AFTD01.3.bbs.gz 114.8 Mb
 AFTD01.4.bbs.gz 114.8 Mb
 AFTD01.5.bbs.gz 78.4 Mb