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Sequence Set Browser

 

ADCL00000000.1 Bacteroides sp. 1_1_30

Master
# of Contigs: 171
# of Proteins: 5,299
# of Scaffolds/Chrs: 73
Total length: 6,441,725 bp
BioProject: PRJNA41955
BioSample: SAMN02463820
Keywords: WGS
Annotation: Contigs
Organism: Bacteroides sp. 1_1_30show lineagehide lineage
Biosource:
/host = Homo sapiens
/isolation_source = gastrointestinal tract
/mol_type = genomic
/strain = 1_1_30
WGS: ADCL01000001:ADCL01000171
Scaffolds: GL945090:GL945162
73 scaffolds, total length is 6,480,532 bases
Reference:
The Genome Sequence of Bacteroides sp. 1_1_30 : Unpublished – show 49 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Daigneault,M., Strauss,J., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Mehta,T., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Yandava,C., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (19-APR-2011) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 49 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Daigneault,M., Strauss,J., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Mehta,T., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Yandava,C., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

The Bacteroides sp. 1_1_30 whole genome shotgun (WGS) project has the project accession ADCL00000000. This version of the project (01) has the accession number ADCL01000000, and consists of sequences ADCL01000001-ADCL01000171.

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA and bacteria provided by Daigneault, M., Strauss, J.C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Please be aware that the annotation is done automatically with little or no manual curation. Gene Calling Method: Prodigal.

##Genome-Assembly-Data-START##
Finishing Goal : High-Quality Draft
Current Finishing Status : High-Quality Draft
Assembly Method : Newbler v. 2.3-PostRelease-11/19/2009
Assembly Name : Bacteroides_sp_1_1_30_V1
Genome Coverage : 68x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ADCL01.1.gbff.gz 4.4 Mb
FASTA:ADCL01.1.fsa_nt.gz 1.9 Mb
ASN.1:ADCL01.1.bbs.gz 3.2 Mb