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Sequence Set Browser

 

ACXO00000000.1 Escherichia coli O157:H7 str. FRIK2000

Master
# of Contigs: 247
# of Proteins: 0
Total length: 5,408,690 bp
BioProject: PRJNA36543
BioSample: SAMN02470827
Keywords: WGS
Organism: Escherichia coli O157:H7 str. FRIK2000show lineagehide lineage
Biosource:
/isolation_source = bovine fecal sample
/mol_type = genomic genomic
/serovar = O157:H7
/strain = FRIK2000
WGS: ACXO01000001:ACXO01000247
Reference:
Microarray analysis and draft genomes of two Escherichia coli O157:H7 lineage II cattle isolates FRIK966 and FRIK2000 investigating lack of Shiga toxin expression : Unpublished – show 10 authorshide authors
Dowd,S.E., Wolcott,R.D., Sun,Y., Gontcharova,V., Youn,E., Ricke,S.C., Callaway,T.R., Kasper,C., Muthaiyan,A., Domingo,A.
Submission:
Submitted (08-AUG-2009) Medical Biofilm Research Institute, Research and Testing Laboratory, 4321 Marsha Sharp Fwy, Lubbock, TX 79407, USA – show 10 authorshide authors
Dowd,S.E., Wolcott,R.D., Sun,Y., Gontcharova,V., Youn,E., Ricke,S.C., Callaway,T.R., Kasper,C., Muthaiyan,A., Domingo,A.

The Escherichia coli O157:H7 str. FRIK2000 whole genome shotgun (WGS) project has the project accession ACXO00000000. This version of the project (01) has the accession number ACXO01000000, and consists of sequences ACXO01000001-ACXO01000247.

Escherichia coli O157:H7 str. FRIK2000 is a bovine isolate which does not express Shiga toxin and is part of a secondary lineage of O157:H7 suggested to be less pathogenic. Genome Coverage: 10-22x Sequencing Technology: 454.

Contigs
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GenBank:ACXO01.1.gbff.gz 2.3 Mb
FASTA:ACXO01.1.fsa_nt.gz 1.6 Mb
ASN.1:ACXO01.1.bbs.gz 1.3 Mb