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Sequence Set Browser

 

ACVX00000000.1 Ruminiclostridium thermocellum DSM 2360

Master
# of Contigs: 110
# of Proteins: 3,091
Total length: 3,454,608 bp
BioProject: PRJNA32579
BioSample: SAMN00017478
Keywords: WGS
Annotation: Contigs
Organism: Ruminiclostridium thermocellum DSM 2360show lineagehide lineage
Biosource:
/isolation_source = contaminant of Clostridium thermocellum strain LQ8
/mol_type = genomic
/strain = DSM 2360
WGS: ACVX01000001:ACVX01000110
Reference:
The draft genome of Clostridium thermocellum DSM 2360 : Unpublished – show 13 authorshide authors
Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L., Hemme,C.L., US DOE Joint Genome Institute (JGI-PGF)
Submission:
Submitted (17-JUL-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA – show 13 authorshide authors
Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L., Hemme,C.L., US DOE Joint Genome Institute (JGI-PGF)

The Ruminiclostridium thermocellum DSM 2360 whole genome shotgun (WGS) project has the project accession ACVX00000000. This version of the project (01) has the accession number ACVX01000000, and consists of sequences ACVX01000001-ACVX01000110.

URL -- http://www.jgi.doe.gov JGI Project ID: 4085028 Source DNA and Bacteria available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).

##Metadata-START##
Organism Display Name : Clostridium thermocellum DSM 2360
Culture Collection ID : DSM 2360
GOLD Stamp ID : Gi02594
Isolation Site : contaminant of Clostridium thermocellum strain LQ8
Isolation Country : USA
Oxygen Requirement : Anaerobe
Cell Shape : Rod-shaped
Motility : Motile
Sporulation : Sporulating
Temperature Range : Thermophile
Temperature Optimum : 60 C
Gram Staining : gram+
Biotic Relationship : Free living
Diseases : None
Phenotypes : Cellulose degrader, Ethanogenic, Ethanol production
Energy Source : Chemoorganotroph
##Metadata-END##
Contigs
Proteins
Download

Contigs:

GenBank:ACVX01.1.gbff.gz 2.5 Mb
FASTA:ACVX01.1.fsa_nt.gz 1 Mb
ASN.1:ACVX01.1.bbs.gz 1.9 Mb

Proteins:

GenPept:ACVX01P.1.gnp.gz 1015.5 kb
FASTA:ACVX01P.1.fsa_aa.gz 630.3 kb
ASN.1:ACVX01P.1.bbs.gz 761.3 kb
History
Minor Version Create Date
1 08/17/2009
7 11/11/2017
8 11/18/2017