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Sequence Set Browser

 

ACHQ00000000.1 Mycobacterium africanum K85

Master
# of Contigs: 154
# of Proteins: 4,090
# of Scaffolds/Chrs: 1
Total length: 4,399,672 bp
BioProject: PRJNA34555
BioSample: SAMN02595307
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Mycobacterium africanum K85show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = K85
WGS: ACHQ01000001:ACHQ01000154
Scaffolds: GG663503:GG663503
1 scaffold, 4,090 proteins, total length is 4,432,952 bases
Reference:
The Genome Sequence of Mycobacterium africanum strain K85 (originally listed here as Mycobacterium tuberculosis) : Unpublished – show 40 authorshide authors
Small,P., Gagneaux,S., Hopewell,P., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Nusbaum,C., Galagan,J., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (04-MAR-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 40 authorshide authors
Small,P., Gagneaux,S., Hopewell,P., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Nusbaum,C., Galagan,J., Birren,B., The Broad Institute Genome Sequencing Platform

The Mycobacterium africanum K85 whole genome shotgun (WGS) project has the project accession ACHQ00000000. This version of the project (01) has the accession number ACHQ01000000, and consists of sequences ACHQ01000001-ACHQ01000154.

Genome Coverage: 10.4X (8.9X Q>20) Sequencing Technology: ABI Annotation was added to the scaffolds in February 2010. The species was corrected to 'africanum' in January 2014.

##Genome-Assembly-Data-START##
Assembly Method : Unknown v. before 2009
Genome Coverage : 10.4x
Sequencing Technology : ABI
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:ACHQ01.1.gbff.gz 1.8 Mb
FASTA:ACHQ01.1.fsa_nt.gz 1.3 Mb
ASN.1:ACHQ01.1.bbs.gz 1.1 Mb