skip to main content

Sequence Set Browser

 

ACEU00000000.1 Streptomyces sp. SPB78

Master
# of Contigs: 694
# of Proteins: 6,386
# of Scaffolds: 4
Total length: 6,897,976 bp
BioProject: PRJNA33597
BioSample: SAMN02595296
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Streptomyces sp. SPB78show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = SPB78
WGS: ACEU01000001:ACEU01000694
Scaffolds: GG657742:GG657745
4 scaffolds, 6,386 proteins, total length is 7,557,384 bases
Reference:
Annotation of Streptomyces sp. strain SPB78 : Unpublished – show 52 authorshide authors
Fischbach,M., Godfrey,P., Ward,D., Young,S., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A.M., Bochicchio,J., Borenstein,D., Chapman,S.B., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D.I., Hepburn,T.A., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Roberts,A., Saif,S., Shea,T.D., Shenoy,N., Sisk,P., Stolte,C., Sykes,S.N., Thomson,T., Walk,T., White,J., Yandava,C., Straight,P., Clardy,J., Hung,D., Kolter,R., Mekalanos,J., Walker,S., Walsh,C.T., Wieland-Brown,L.C., Haas,B., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform, Broad Institute Microbial Sequencing Center
Submission:
Submitted (09-FEB-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 48 authorshide authors
Fischbach,M., Godfrey,P., Ward,D., Young,S., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A.M., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D.I., Hepburn,T.A., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T.D., Shenoy,N., Sisk,P., Stolte,C., Sykes,S.N., Walk,T., White,J., Yandava,C., Straight,P., Clardy,J., Hung,D., Kolter,R., Mekalanos,J., Walker,S., Walsh,C.T., Wieland-Brown,L.C., Galagan,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform, Broad Institute Microbial Sequencing Center

The Streptomyces sp. SPB78 whole genome shotgun (WGS) project has the project accession ACEU00000000. This version of the project (01) has the accession number ACEU01000000, and consists of sequences ACEU01000001-ACEU01000694.

Annotation was added to the scaffolds in August 2010.

##Genome-Assembly-Data-START##
Assembly Method : Arachne v. April 2007
Genome Coverage : 9x
Sequencing Technology : ABI
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:ACEU01.1.gbff.gz 2.8 Mb
FASTA:ACEU01.1.fsa_nt.gz 1.9 Mb
ASN.1:ACEU01.1.bbs.gz 1.9 Mb