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Sequence Set Browser

 

ACEA00000000.1 Eikenella corrodens ATCC 23834

Master
# of Contigs: 65
# of Proteins: 2,627
# of Scaffolds/Chrs: 12
Total length: 2,135,355 bp
BioProject: PRJNA30493
BioSample: SAMN00008822
Keywords: WGS
Annotation: Contigs
Organism: Eikenella corrodens ATCC 23834show lineagehide lineage
Biosource:
/culture_collection = ATCC:23834
/mol_type = genomic
/strain = ATCC 23834
WGS: ACEA01000001:ACEA01000065
Scaffolds: EQ973316:EQ973327
12 scaffolds, total length is 2,171,245 bases
Submission:
Submitted (13-JAN-2009) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park, St. Louis, MO 63108, USA – show 16 authorshide authors
Fulton,L., Clifton,S., Chinwalla,A.T., Mitreva,M., Sodergren,E., Weinstock,G., Clifton,S., Dooling,D.J., Fulton,B., Minx,P., Pepin,K.H., Johnson,M., Bhonagiri,V., Nash,W.E., Mardis,E.R., Wilson,R.K.

The Eikenella corrodens ATCC 23834 whole genome shotgun (WGS) project has the project accession ACEA00000000. This version of the project (01) has the accession number ACEA01000000, and consists of sequences ACEA01000001-ACEA01000065.

Eikenella corrodens (GenBank Accession Number for 16S rDNA gene: M22512) is a member of the Proteobacteria division of the domain bacteria and has been isolated from the oral cavity. The sequenced strain was obtained from Sue Haake (ATCC 23834). This is a Newbler assembly (http://www.454.com/enabling-technology/the-software.asp) comprised of 1/2 plate FLX PE 454 Data with a Q20 coverage of 36.1 X. This strain was sequenced as part of the NIH Human Microbiome Project. One aim of the HMP is to build a catalog of reference genome sequences of organisms comprising the human microbiota, and this sequence is contributed as part of that effort. This work was supported by the National Human Genome Research Institute and the NIH Roadmap Human Microbiome Project [http://nihroadmap.nih.gov/hmp/].

Product names were updated in June 2013.

Contigs
Proteins
Download
GenBank:ACEA01.1.gbff.gz 1.6 Mb
FASTA:ACEA01.1.fsa_nt.gz 640.6 kb
ASN.1:ACEA01.1.bbs.gz 1.3 Mb