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Sequence Set Browser

 

ACDT00000000.2 Coprobacillus sp. D7

Master
# of Contigs: 168
# of Proteins: 3,304
# of Scaffolds: 37
Total length: 3,514,630 bp
BioProject: PRJNA32495
BioSample: SAMN02595286
Keywords: WGS
Annotation: Contigs
Organism: Coprobacillus sp. D7show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = D7
WGS: ACDT02000001:ACDT02000168
Scaffolds: KI391993:KI392029
37 scaffolds, total length is 3,527,730 bases
Reference:
The Genome Sequence of Erysipelotrichaceae bacterium D7 : Unpublished – show 48 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Ambrose,C., White,A., Sibley,C., Strauss,J., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (05-FEB-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 44 authorshide authors
Ward,D., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Allen-Vercoe,E., Strauss,J., Sibley,C., White,A., Ambrose,C., Lander,E., Nusbaum,C., Galagan,J., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (20-OCT-2011) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 48 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Ambrose,C., White,A., Sibley,C., Strauss,J., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

On Aug 28, 2013 this sequence version replaced gi:223714215.

The Coprobacillus sp. D7 whole genome shotgun (WGS) project has the project accession ACDT00000000. This version of the project (02) has the accession number ACDT02000000, and consists of sequences ACDT02000001-ACDT02000168.

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA provided by Ambrose, C., Sibley, C., White, A., Strauss, J.C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Bacteria provided by Ambrose, C., Sibley, C., White, A., Strauss, J.C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Please be aware that the annotation is done automatically with little or no manual curation.

##Genome-Assembly-Data-START##
Finishing Goal : High-Quality Draft
Current Finishing Status : High-Quality Draft
Assembly Method : Newbler v. 2.0.0-PreRelease-04/10/2008
Assembly Name : Erys_bact_D7_V2
Genome Coverage : 19.67x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ACDT02.1.gbff.gz 2.4 Mb
FASTA:ACDT02.1.fsa_nt.gz 1 Mb
ASN.1:ACDT02.1.bbs.gz 1.8 Mb