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Sequence Set Browser

 

ACDK00000000.2 Clostridium sp. 7_2_43FAA

Master
# of Contigs: 58
# of Proteins: 3,392
# of Scaffolds/Chrs: 5
Total length: 3,807,822 bp
BioProject: PRJNA32457
BioSample: SAMN02463700
Keywords: WGS
Annotation: Contigs
Organism: Clostridium sp. 7_2_43FAAshow lineagehide lineage
Biosource:
/mol_type = genomic
/strain = 7_2_43FAA
WGS: ACDK02000001:ACDK02000058
Scaffolds: JH815220:JH815224
5 scaffolds, total length is 3,813,122 bases
Reference:
The Genome Sequence of Clostridium sp. 7_2_43FAA : Unpublished – show 43 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Allen-Vercoe,E., Strauss,J., Ambrose,C., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Chapman,S.B., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Heiman,D., Howarth,C., Larimer,J., Lui,A., MacDonald,P.J.P., McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (05-FEB-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 43 authorshide authors
Ward,D., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Allen-Vercoe,E., Strauss,J., Ambrose,C., Lander,E., Nusbaum,C., Ilzarbe,M., Galagan,J., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (06-JAN-2012) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 43 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Allen-Vercoe,E., Strauss,J., Ambrose,C., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Chapman,S.B., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Heiman,D., Howarth,C., Larimer,J., Lui,A., MacDonald,P.J.P., McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

On Sep 11, 2012 this sequence version replaced gi:223713372.

The Clostridium sp. 7_2_43FAA whole genome shotgun (WGS) project has the project accession ACDK00000000. This version of the project (02) has the accession number ACDK02000000, and consists of sequences ACDK02000001-ACDK02000058.

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA provided by Strauss, J., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Bacteria provided by Strauss, J., Ambrose, C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Please be aware that the annotation is done automatically with little or no manual curation. Gene Calling Method: Prodigal.

##Genome-Assembly-Data-START##
Finishing Goal : High-Quality Draft
Current Finishing Status : High-Quality Draft
Assembly Method : Newbler v. 2.3-PostRelease-11/19/2009
Assembly Name : Clostridium_sp_7_2_43FAA_V2
Genome Coverage : 29x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ACDK02.1.gbff.gz 2.4 Mb
FASTA:ACDK02.1.fsa_nt.gz 1.1 Mb
ASN.1:ACDK02.1.bbs.gz 1.8 Mb