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Sequence Set Browser

 

ACDH00000000.2 Fusobacterium ulcerans ATCC 49185

Master
# of Contigs: 49
# of Proteins: 3,191
# of Scaffolds/Chrs: 8
Total length: 3,483,404 bp
BioProject: PRJNA32487
BioSample: SAMN02463713
Keywords: WGS
Annotation: Contigs
Organism: Fusobacterium ulcerans ATCC 49185show lineagehide lineage
Biosource:
/culture_collection = ATCC:49185
/mol_type = genomic
/strain = ATCC 49185
WGS: ACDH02000001:ACDH02000049
Scaffolds: JH815228:JH815235
8 scaffolds, total length is 3,487,504 bases
Reference:
The Genome Sequence of Fusobacterium ulcerans ATCC 49185 : Unpublished – show 46 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Strauss,J., Ambrose,C., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (10-FEB-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 42 authorshide authors
Ward,D., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Allen-Vercoe,E., Strauss,J., Ambrose,C., Lander,E., Nusbaum,C., Galagan,J., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (12-OCT-2011) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 46 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Strauss,J., Ambrose,C., Allen-Vercoe,E., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Brown,A., Chapman,S.B., Chen,Z., Dunbar,C., Freedman,E., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Howarth,C., Larson,L., Lui,A., MacDonald,P.J.P., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

On Sep 11, 2012 this sequence version replaced gi:224461998.

The Fusobacterium ulcerans ATCC 49185 whole genome shotgun (WGS) project has the project accession ACDH00000000. This version of the project (02) has the accession number ACDH02000000, and consists of sequences ACDH02000001-ACDH02000049.

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA provided by Ambrose, C., Strauss, J.C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Bacteria provided by Ambrose, C., Strauss, J.C., and Allen-Vercoe, E. (Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, N1G 2W1, Canada). Please be aware that the annotation is done automatically with little or no manual curation. Gene Calling Method: Prodigal.

##Genome-Assembly-Data-START##
Finishing Goal : High-Quality Draft
Current Finishing Status : High-Quality Draft
Assembly Method : Newbler v. 2.0.0-PreRelease-04/10/2008
Assembly Name : Fuso_ulc_ATCC49185_V2
Genome Coverage : 33x
Sequencing Technology : 454
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ACDH02.1.gbff.gz 2.3 Mb
FASTA:ACDH02.1.fsa_nt.gz 1016.6 kb
ASN.1:ACDH02.1.bbs.gz 1.7 Mb