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Sequence Set Browser

 

ABXT00000000.1 Methylophaga thiooxydans DMS010

Master
# of Contigs: 43
# of Proteins: 3,001
# of Scaffolds/Chrs: 26
Total length: 3,018,159 bp
BioProject: PRJNA19323
BioSample: SAMN02436314
Keywords: WGS
Annotation: Scaffolds
Organism: Methylophaga thiooxydans DMS010show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = DMS010
WGS: ABXT01000001:ABXT01000043
Scaffolds: GG657882:GG657907
26 scaffolds, 3,001 proteins, total length is 3,047,652 bases
Reference:
Draft Genome Sequence of the Chemolithoheterotrophic, Halophilic Methylotroph Methylophaga thiooxydans DMS010 : J. Bacteriol. 193 (12), 3154-3155 (2011) – show 6 authorshide authors
Boden,R., Ferriera,S., Johnson,J., Kelly,D.P., Murrell,J.C., Schafer,H.
Submission:
Submitted (23-JAN-2008) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA – show 10 authorshide authors
Schaefer,H., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M., Venter,J.C.

The Methylophaga thiooxydans DMS010 whole genome shotgun (WGS) project has the project accession ABXT00000000. This version of the project (01) has the accession number ABXT01000000, and consists of sequences ABXT01000001-ABXT01000043.

With funding from the Gordon and Betty Moore Foundation (www.moore.org), the J. Craig Venter Institute (www.jcvi.org) is sequencing, assembling, and auto-annotating the genomes of approximately 165 marine microbes. These microbes were contributed by collaborators worldwide, and embody an array of physiological diversity, including carbon fixers, photoautotrophs, photoheterotrophs, nitrifiers, and methanotrophs. This work was designed to complement other ongoing research at JCVI and elsewhere to characterize the microbial biodiversity of marine and terrestrial environments through metagenomics profiling of environmental samples. Please be aware that the annotation is done automatically with little or no manual curation. The organism name was updated to Methylophaga thiooxidans DMS010 in May 2009.

Contigs
Download
GenBank:ABXT01.1.gbff.gz 1.3 Mb
FASTA:ABXT01.1.fsa_nt.gz 918.1 kb
ASN.1:ABXT01.1.bbs.gz 737.9 kb