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Sequence Set Browser

 

ABVW00000000.1 Flavobacteria bacterium MS024-3C

Master
# of Contigs: 21
# of Proteins: 1,384
Total length: 1,515,248 bp
BioProject: PRJNA28051
BioSample: SAMN02441804
Keywords: WGS
Annotation: Contigs
Organism: Flavobacteria bacterium MS024-3Cshow lineagehide lineage
Biosource:
/collection_date = 28-Mar-2005
/country = USA: Maine
/isolation_source = Boothbay harbor, 1m depth
/lat_lon = 43.83352 N 69.63347 W
/mol_type = genomic
/strain = MS024-3C
WGS: ABVW01000001:ABVW01000021
Reference:
Assembling the metagenome, one cell at a time : Unpublished – show 14 authorshide authors
Woyke,T., Xie,G., Copeland,A., Gonzalez,J., Han,C., Kiss,H., Saw,J., Senin,P., Chatterji,S., Cheng,J.-F., Eisen,J.A., Sieracki,M.E., Stepanauskas,R., US DOE Joint Genome Institute (JGI-PGF)
Submission:
Submitted (01-AUG-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA – show 24 authorshide authors
Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L., Woyke,T., Xie,G., Gonzalez,J., Han,C., Kiss,H., Saw,J., Senin,P., Chatterji,S., Cheng,J.-F., Eisen,J.A., Sieracki,M.E., Stepanauskas,R., US DOE Joint Genome Institute (JGI-PGF)

The Flavobacteria bacterium MS024-3C whole genome shotgun (WGS) project has the project accession ABVW00000000. This version of the project (01) has the accession number ABVW01000000, and consists of sequences ABVW01000001-ABVW01000021.

URL -- http://www.jgi.doe.gov JGI Project ID: 4043141 DNA source is whole genome multiple displacement products from a single, uncultured cell Source DNA and Bacteria available from Ramunas Stepanauskas (rstepanauskas@bigelow.org) Contacts: Ramunas Stepanauskas (rstepanauskas@bigelow.org) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).

Contigs
Proteins
Download
GenBank:ABVW01.1.gbff.gz 1.1 Mb
FASTA:ABVW01.1.fsa_nt.gz 457.8 kb
ASN.1:ABVW01.1.bbs.gz 855.8 kb