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Sequence Set Browser

 

ABVV00000000.1 Flavobacteria bacterium MS024-2A

Master
# of Contigs: 17
# of Proteins: 1,772
Total length: 1,905,484 bp
BioProject: PRJNA28049
BioSample: SAMN02441803
Keywords: WGS
Annotation: Contigs
Organism: Flavobacteria bacterium MS024-2Ashow lineagehide lineage
Biosource:
/collection_date = 28-Mar-2005
/country = USA: Maine
/isolation_source = Boothbay harbor, 1m depth
/lat_lon = 43.83352 N 69.63347 W
/mol_type = genomic
/strain = MS024-2A
WGS: ABVV01000001:ABVV01000017
Reference:
Assembling the metagenome, one cell at a time : Unpublished – show 14 authorshide authors
Woyke,T., Xie,G., Copeland,A., Gonzalez,J., Han,C., Kiss,H., Saw,J., Senin,P., Chatterji,S., Cheng,J.-F., Eisen,J.A., Sieracki,M.E., Stepanauskas,R., US DOE Joint Genome Institute (JGI-PGF)
Submission:
Submitted (01-AUG-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA – show 24 authorshide authors
Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L., Woyke,T., Xie,G., Gonzalez,J., Han,C., Kiss,H., Saw,J., Senin,P., Chatterji,S., Cheng,J.-F., Eisen,J.A., Sieracki,M.E., Stepanauskas,R., US DOE Joint Genome Institute (JGI-PGF)

The Flavobacteria bacterium MS024-2A whole genome shotgun (WGS) project has the project accession ABVV00000000. This version of the project (01) has the accession number ABVV01000000, and consists of sequences ABVV01000001-ABVV01000017.

URL -- http://www.jgi.doe.gov JGI Project ID: 4043142 DNA source is whole genome multiple displacement amplification products from a single, uncultured cell Source DNA available from Ramunas Stepanauskas (rstepanauskas@bigelow.org) Contacts: Ramunas Stepanauskas (rstepanauskas@bigelow.org) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).

Contigs
Proteins
Download
GenBank:ABVV01.1.gbff.gz 1.3 Mb
FASTA:ABVV01.1.fsa_nt.gz 575.4 kb
ASN.1:ABVV01.1.bbs.gz 1 Mb