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Sequence Set Browser

 

ABRE00000000.1 Moniliophthora perniciosa FA553

Master
# of Contigs: 25,056
# of Proteins: 13,560
Total length: 26,663,261 bp
BioProject: PRJNA28951
BioSample: SAMN02953729
Keywords: WGS
Annotation: Contigs
Organism: Moniliophthora perniciosa FA553show lineagehide lineage
Biosource:
/biotype = C
/mol_type = genomic
/strain = FA553
WGS: ABRE01000001:ABRE01025056
Reference:
A genome survey of Moniliophthora perniciosa gives new insights into Witches' Broom Disease of cacao : BMC Genomics 9, 548 (2008) – show 30 authorshide authors
Mondego,J.M., Carazzolle,M.F., Costa,G.G., Formighieri,E.F., Parizzi,L.P., Rincones,J., Cotomacci,C., Carraro,D.M., Cunha,A.F., Carrer,H., Vidal,R.O., Estrela,R.C., Garcia,O., Thomazella,D.P., de Oliveira,B.V., Pires,A.B., Rio,M.C., Araujo,M.R., de Moraes,M.H., Castro,L.A., Gramacho,K.P., Goncalves,M.S., Neto,J.P., Neto,A.G., Barbosa,L.V., Guiltinan,M.J., Bailey,B.A., Meinhardt,L.W., Cascardo,J.C., Pereira,G.A.
Submission:
Submitted (19-AUG-2008) Laboratorio de Genomica e Expressao, Departamento de Genetica e Evolucao, Instituto de Biologia, Universidade Estadual de Campinas, Cidade Universitaria Zeferino Vaz, Campinas, Sao Paulo 13083-970, Brasil – show 30 authorshide authors
Mondego,J.M.C., Carazzolle,M.F., Costa,G.G.L., Formighieri,E.F., Parizzi,L.P., Rincones,J., Cotomacci,C., Carraro,D.M., Cunha,A.F., Carrer,H., Vidal,R.O., Estrela,R.C., Garcia,O., Thomazella,D.P.T., de Oliveira,B.V., Pires,A.B.L., Rio,M.C.S., Araujo,M.R.R., de Moraes,M.H., Castro,L.A.B., Gramacho,K.P., Goncalves,M.S., Neto,A.G., Barbosa,L.V., Guiltinan,M.J., Bailey,B.A., Meinhardt,L.W., Cascardo,J.C.M., Pereira,G.A.G., Moniliophthora perniciosa genome project

The Moniliophthora perniciosa FA553 whole genome shotgun (WGS) project has the project accession ABRE00000000. This version of the project (01) has the accession number ABRE01000000, and consists of sequences ABRE01000001-ABRE01025056.

Contigs ABRE01001187 ABRE01003672 ABRE01009875 ABRE01010381 ABRE01011006 ABRE01011419 ABRE01012265 ABRE01018553 ABRE01018752 ABRE01022003 ABRE01024029 ABRE01024864 were updated to correct the translations of their CDS in November 2015.

##Genome-Assembly-Data-START##
Assembly Method : PHRED-PHRAP v. 2007
Genome Coverage : 1.9x
Sequencing Technology : ABI 3700
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ABRE01.1.gbff.gz 16.6 Mb
FASTA:ABRE01.1.fsa_nt.gz 8.4 Mb
ASN.1:ABRE01.1.bbs.gz 12 Mb