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ABQX00000000.1 soil metagenome
# of Contigs: 878 # of Proteins: 0 Total length: 612,702 bp BioProject: PRJNA20811 BioSample: SAMN02954285 Keywords: WGS Organism: soil metagenome – show lineagehide lineage Biosource:/collection_date = Jun-2007/country = South Korea: Daejeon city/environmental_sample/isolation_source = viral metagenomic DNA from rice paddy soil/lat_lon = 36.3875 N 127.3392 E/metagenomic/mol_type = genomic WGS: ABQX01000001:ABQX01000878 Reference:Amplification of uncultured single-stranded DNA viruses from rice paddy soil : Appl. Environ. Microbiol. 74 (19), 5975-5985 (2008) – show 9 authorshide authorsKim,K.H., Chang,H.W., Nam,Y.D., Roh,S.W., Kim,M.S., Sung,Y., Jeon,C.O., Oh,H.M., Bae,J.W. Submission:Submitted (12-JUN-2008) Biological Resource Center, Korea Research Institute of Bioscience & Biotechnology, 111 Gwahangno, Yuseong-gu, Daejeon 305-806, Republic of Korea – show 9 authorshide authorsKim,K.-H., Chang,H.-W., Nam,Y.-D., Roh,S.W., Sung,Y., Kim,M.-S., Jeon,C.-O., Oh,H.-M., Bae,J.-W.
The soil metagenome whole genome shotgun (WGS) project has the project accession ABQX00000000. This version of the project (01) has the accession number ABQX01000000, and consists of sequences ABQX01000001-ABQX01000878.
Putative viral metagenome project from rice paddy soil at Daejon City, South Korea. Viral DNA was purified using ultracentrifugation and sequential filtration, and DNA was amplified using multiple displacement amplification. Sequences were obtained from random cloning using pUC118 as a vector.