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Sequence Set Browser


ABOM00000000.1 freshwater metagenome

# of Contigs: 57,134
# of Proteins: 0
Total length: 5,773,770 bp
BioProject: PRJNA28601
BioSample: SAMN02954289
Keywords: WGS
Organism: freshwater metagenomeshow lineagehide lineage
/clone_lib = TilPondKentSTVir0806
/collection_date = Aug-2006
/isolation_source = viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA)
/lat_lon = 33.537594 N 116.097748 W
/mol_type = genomic genomic
WGS: ABOM01000001:ABOM01057134
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Dynamics of the viral and microbial community in a freshwater aquaculture system : Unpublished – show 11 authorshide authors
Li,L., Desnues,C., Rayhawk,S., Rodriguez-Brito,B., Liu,H., Angly,F., Felts,B., Edwards,R.A., Haynes,M., Buchanan,J.T., Rohwer,F.
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The freshwater metagenome whole genome shotgun (WGS) project has the project accession ABOM00000000. This version of the project (01) has the accession number ABOM01000000, and consists of sequences ABOM01000001-ABOM01057134.

GenBank:ABOM01.1.gbff.gz 4.2 Mb
FASTA:ABOM01.1.fsa_nt.gz 2 Mb
ASN.1:ABOM01.1.bbs.gz 2.4 Mb