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Sequence Set Browser


ABNV00000000.1 coral metagenome

# of Contigs: 65,008
# of Proteins: 0
Total length: 7,496,538 bp
BioProject: PRJNA28437
BioSample: SAMN00000171
Keywords: WGS
Organism: coral metagenomeshow lineagehide lineage
/clone_lib = NutPorCompHawMic0206
/isolation_source = microbial fraction from whole Porites compressa tissue extracts taken from a nutrient stressor experiment that consisted of 5 liters of ambient seawater with additional 10 mM excess of each: nitrate (Ca(NO3)2), nitrite (NaNO2), ammonium (NH4Cl), and phosphate (KH2PO4) that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours
/lat_lon = 21.434025 N 157.787827 W
/mol_type = genomic genomic
/note = collected 02/23/2006-02/25/2006
WGS: ABNV01000001:ABNV01065008
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The coral metagenome whole genome shotgun (WGS) project has the project accession ABNV00000000. This version of the project (01) has the accession number ABNV01000000, and consists of sequences ABNV01000001-ABNV01065008.

GenBank:ABNV01.1.gbff.gz 5.3 Mb
FASTA:ABNV01.1.fsa_nt.gz 2.3 Mb
ASN.1:ABNV01.1.bbs.gz 2.9 Mb