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Sequence Set Browser


ABNU00000000.1 coral metagenome

# of Contigs: 67,994
# of Proteins: 0
Total length: 7,707,388 bp
BioProject: PRJNA28435
BioSample: SAMN00000170
Keywords: WGS
Organism: coral metagenomeshow lineagehide lineage
/clone_lib = pHPorCompHawMic0206
/isolation_source = microbial fraction from whole Porites compressa tissue extracts taken from a reduced pH stressor experiment that consisted of 5 liters of seawater with molecular grade HCl added to a final pH 68 that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours
/lat_lon = 21.434025 N 157.787827 W
/mol_type = genomic genomic
/note = collected 02/23/2006-02/25/2006
WGS: ABNU01000001:ABNU01067994
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The coral metagenome whole genome shotgun (WGS) project has the project accession ABNU00000000. This version of the project (01) has the accession number ABNU01000000, and consists of sequences ABNU01000001-ABNU01067994.

GenBank:ABNU01.1.gbff.gz 5.3 Mb
FASTA:ABNU01.1.fsa_nt.gz 2.3 Mb
ASN.1:ABNU01.1.bbs.gz 3.1 Mb