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Sequence Set Browser

 

ABNU00000000.1 coral metagenome

Master
# of Contigs: 67,994
# of Proteins: 0
Total length: 7,707,388 bp
BioProject: PRJNA28435
BioSample: SAMN00000170
Keywords: WGS
Organism: coral metagenomeshow lineagehide lineage
Biosource:
/clone_lib = pHPorCompHawMic0206
/environmental_sample
/isolation_source = microbial fraction from whole Porites compressa tissue extracts taken from a reduced pH stressor experiment that consisted of 5 liters of seawater with molecular grade HCl added to a final pH 68 that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours
/lat_lon = 21.434025 N 157.787827 W
/metagenomic
/mol_type = genomic genomic
/note = collected 02/23/2006-02/25/2006
WGS: ABNU01000001:ABNU01067994
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The coral metagenome whole genome shotgun (WGS) project has the project accession ABNU00000000. This version of the project (01) has the accession number ABNU01000000, and consists of sequences ABNU01000001-ABNU01067994.

Contigs
Download
GenBank:ABNU01.1.gbff.gz 5.3 Mb
FASTA:ABNU01.1.fsa_nt.gz 2.3 Mb
ASN.1:ABNU01.1.bbs.gz 3.1 Mb