skip to main content

Sequence Set Browser


ABND00000000.1 fish metagenome

# of Contigs: 61,476
# of Proteins: 0
Total length: 6,050,549 bp
BioProject: PRJNA28401
BioSample: SAMN00000154
Keywords: WGS
Organism: fish metagenomeshow lineagehide lineage
/clone_lib = FishHealSlimKentSTVir050406
/collection_date = 04-May-2006
/isolation_source = viral fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease
/lat_lon = 33.537594 N 116.097748 W
/mol_type = genomic genomic
WGS: ABND01000001:ABND01061476
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The fish metagenome whole genome shotgun (WGS) project has the project accession ABND00000000. This version of the project (01) has the accession number ABND01000000, and consists of sequences ABND01000001-ABND01061476.

GenBank:ABND01.1.gbff.gz 4.3 Mb
FASTA:ABND01.1.fsa_nt.gz 2.1 Mb
ASN.1:ABND01.1.bbs.gz 2.6 Mb