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Sequence Set Browser

 

ABMK00000000.1 marine metagenome

Master
# of Contigs: 289,723
# of Proteins: 0
Total length: 30,792,298 bp
BioProject: PRJNA28363
BioSample: SAMN00000135
Keywords: WGS
Organism: marine metagenomeshow lineagehide lineage
Biosource:
/clone_lib = PalmLIMic081805
/collection_date = 18-Aug-2005
/environmental_sample
/isolation_source = microbial fraction (100-045 micron) from water below the boundary layer (eg, crevices and benthic surfaces) of Palmyra (Northern Line Islands)
/lat_lon = 5.86683321 N 162.12796021 W
/metagenomic
/mol_type = genomic genomic
WGS: ABMK01000001:ABMK01289723
Reference:
Microbial ecology of four coral atolls in the Northern Line Islands : PLoS ONE 3 (2), E1584 (2008) – show 18 authorshide authors
Dinsdale,E.A., Pantos,O., Smriga,S., Edwards,R.A., Angly,F., Wegley,L., Hatay,M., Hall,D., Brown,E., Haynes,M., Krause,L., Sala,E., Sandin,S.A., Thurber,R.V., Willis,B.L., Azam,F., Knowlton,N., Rohwer,F.
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The marine metagenome whole genome shotgun (WGS) project has the project accession ABMK00000000. This version of the project (01) has the accession number ABMK01000000, and consists of sequences ABMK01000001-ABMK01289723.

Contigs
Download
GenBank:ABMK01.1.gbff.gz 24.5 Mb
FASTA:ABMK01.1.fsa_nt.gz 11.4 Mb
ASN.1:ABMK01.1.bbs.gz 12.7 Mb
History
Minor Version Create Date
1 04/24/2008
5 11/11/2017
6 11/18/2017