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Sequence Set Browser

 

ABIT00000000.1 Coccidioides posadasii RMSCC 1038

Master
# of Contigs: 4,893
# of Proteins: 0
# of Scaffolds/Chrs: 554
Total length: 23,601,803 bp
BioProject: PRJNA17785
BioSample: SAMN02953713
Keywords: WGS
Organism: Coccidioides posadasii RMSCC 1038show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = RMSCC 1038
WGS: ABIT01000001:ABIT01004893
Scaffolds: DS560667:DS561220
554 scaffolds, total length is 26,175,928 bases
Reference:
The Genome Sequence of Coccidioides posadasii RMSCC 1038 : Unpublished – show 23 authorshide authors
Henn,M.R., Jaffe,D., Young,S., Gnerre,S., Grabherr,M., Mauceli,E., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Alvarado,L., Zeng,Q., Kodira,C.D., Antoine,C., Devon,K., Lewis,M.L., Orsborn,K., Galgiani,J., Lander,E., Galagan,J., Nusbaum,C., Birren,B., Coccidioides Genome Resources Consortium; Broad Institute Genome Sequencing Platform; Broad Institute Microbial Sequencing Center
Reference:
Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control : Genome Res. 20 (7), 938-946 (2010) – show 29 authorshide authors
Neafsey,D.E., Barker,B.M., Sharpton,T.J., Stajich,J.E., Park,D.J., Whiston,E., Hung,C.Y., McMahan,C., White,J., Sykes,S., Heiman,D., Young,S., Zeng,Q., Abouelleil,A., Aftuck,L., Bessette,D., Brown,A., FitzGerald,M., Lui,A., Macdonald,J.P., Priest,M., Orbach,M.J., Galgiani,J.N., Kirkland,T.N., Cole,G.T., Birren,B.W., Henn,M.R., Taylor,J.W., Rounsley,S.D.
Submission:
Submitted (22-JAN-2008) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 23 authorshide authors
Henn,M.R., Jaffe,D., Young,S., Gnerre,S., Grabherr,M., Mauceli,E., Berlin,A., Heiman,D., Hepburn,T., Sykes,S., Alvarado,L., Zeng,Q., Kodira,C.D., Antoine,C., Devon,K., Lewis,M.L., Orsborn,K., Galgiani,J., Lander,E., Galagan,J., Nusbaum,C., Birren,B., Coccidioides Genome Resources Consortium; Broad Institute Genome Sequencing Platform; Broad Institute Microbial Sequencing Center

The Coccidioides posadasii RMSCC 1038 whole genome shotgun (WGS) project has the project accession ABIT00000000. This version of the project (01) has the accession number ABIT01000000, and consists of sequences ABIT01000001-ABIT01004893.

This assembly represents 3x coverage of the genome.

Contigs
Download
GenBank:ABIT01.1.gbff.gz 10.1 Mb
FASTA:ABIT01.1.fsa_nt.gz 7.1 Mb
ASN.1:ABIT01.1.bbs.gz 9.4 Mb
History
Minor Version Create Date
1 01/28/2008
7 11/10/2017
8 11/11/2017
9 11/17/2017
10 11/18/2017