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Sequence Set Browser


ABFJ00000000.1 Monosiga brevicollis MX1

# of Contigs: 2,143
# of Proteins: 9,172
# of Scaffolds/Chrs: 218
Total length: 38,648,938 bp
BioProject: PRJNA19045
BioSample: SAMN02953695
Keywords: WGS
Annotation: Scaffolds
Organism: Monosiga brevicollis MX1show lineagehide lineage
/mol_type = genomic
/strain = MX1
WGS: ABFJ01000001:ABFJ01002143
Scaffolds: CH991543:CH991760
218 scaffolds, 9,172 proteins, total length is 41,633,360 bases
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans : Nature 451 (7180), 783-788 (2008) – show 36 authorshide authors
King,N., Westbrook,M.J., Young,S.L., Kuo,A., Abedin,M., Chapman,J., Fairclough,S., Hellsten,U., Isogai,Y., Letunic,I., Marr,M., Pincus,D., Putnam,N., Rokas,A., Wright,K.J., Zuzow,R., Dirks,W., Good,M., Goodstein,D., Lemons,D., Li,W., Lyons,J.B., Morris,A., Nichols,S., Richter,D.J., Salamov,A., Sequencing,J.G., Bork,P., Lim,W.A., Manning,G., Miller,W.T., McGinnis,W., Shapiro,H., Tjian,R., Grigoriev,I.V., Rokhsar,D.
Submitted (24-OCT-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA – show 15 authorshide authors
Kuo,A., Salamov,A., Grigoriev,I., Zhou,K., Pitluck,S., Shapiro,H., Lindquist,E., Lucas,S., Glavina del Rio,T., Abedin,M., Westbrook,M.J., Young,S.L., King,N., Rokhsar,D.S., US DOE Joint Genome Institute

The Monosiga brevicollis MX1 whole genome shotgun (WGS) project has the project accession ABFJ00000000. This version of the project (01) has the accession number ABFJ01000000, and consists of sequences ABFJ01000001-ABFJ01002143.

URL -- JGI Project ID: 3633860 Source DNA and stock culture are available from Jody Westbrook ( Contacts: Daniel Rokhsar ( Nicole King ( Annotation done by JGI-PGF and the Micromonas Annotation Team The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. ( This version of the project, V1.0, represents 8.1x coverage of the genome. The annotation is on the scaffolds.

GenBank:ABFJ01.1.gbff.gz 16.7 Mb
FASTA:ABFJ01.1.fsa_nt.gz 11.3 Mb
ASN.1:ABFJ01.1.bbs.gz 9.1 Mb
Minor Version Create Date
1 11/20/2007
4 11/10/2017
5 11/17/2017