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Sequence Set Browser

 

ABFC00000000.1 Haemophilus influenzae HK1212

Master
# of Contigs: 1,262
# of Proteins: 2,049
Total length: 859,497 bp
BioProject: PRJNA20115
BioSample: SAMN02436241
Keywords: WGS
Annotation: Contigs
Organism: Haemophilus influenzae HK1212show lineagehide lineage
Biosource:
/collection_date = 1986
/host = Homo sapiens
/isolation_source = child in central Australia with Brazilian Purpuric Fever
/mol_type = genomic genomic
/strain = HK1212
WGS: ABFC01000001:ABFC01001262
Reference:
Tracing phylogenomic events leading to diversity of Haemophilus influenzae and the emergence of Brazilian Purpuric Fever (BPF)-associated clones : Genomics 96 (5), 290-302 (2010) – show 10 authorshide authors
Papazisi,L., Ratnayake,S., Remortel,B.G., Bock,G.R., Liang,W., Saeed,A.I., Liu,J., Fleischmann,R.D., Kilian,M., Peterson,S.N.
Submission:
Submitted (03-DEC-2009) J. Craig Venter Institute, 9712 Medical Center Dr, Rockville, MD 20850, USA – Ratnayake,S., Papazisi,L., Kilian,M., Peterson,S.N.

The Haemophilus influenzae HK1212 whole genome shotgun (WGS) project has the project accession ABFC00000000. This version of the project (01) has the accession number ABFC01000000, and consists of sequences ABFC01000001-ABFC01001262.

Haemophilus influenzae strain HK1212 was isolated in central Australia in 1986 from a child with characteristic symptomology of Brazilian Purpuric Fever. The reads are derived from sequence captured after subtractive hybridization procedure. Therefore, this is a partial sequence of the HK1212 genome.

##Genome-Assembly-Data-START##
Genome Coverage : 3.49x
Sequencing Technology : Sanger
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:ABFC01.1.gbff.gz 780.3 kb
FASTA:ABFC01.1.fsa_nt.gz 274.5 kb
ASN.1:ABFC01.1.bbs.gz 634.5 kb