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Sequence Set Browser

 

ABBS00000000.2 Histoplasma capsulatum G186AR

Master
# of Contigs: 359
# of Proteins: 9,254
# of Scaffolds/Chrs: 88
Total length: 30,281,958 bp
BioProject: PRJNA12635
BioSample: SAMN02953690
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Histoplasma capsulatum G186ARshow lineagehide lineage
Biosource:
/mol_type = genomic
/strain = G186AR
WGS: ABBS02000001:ABBS02000359
Scaffolds: GG663363:GG663450
88 scaffolds, 9,254 proteins, total length is 30,483,324 bases
Reference:
The Genome Sequence of Ajellomyces capsulatus strain G186AR : Unpublished – show 52 authorshide authors
Champion,M., Cuomo,C., Ma,L.-J., Henn,M.R., Sil,A., Goldman,B., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Klein,B., McEwen,J.G., Puccia,R., Goldman,G.H., Felipe,M.S., Nino-Vega,G., San-Blas,G., Taylor,J., Mendoza,L., Galagan,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (06-AUG-2007) Genome Sequencing Center, Washington University School of Medicine, 4444 Forest Park Parkway, St. Louis, MO 63108, USA – Wilson,R.K.
Submission:
Submitted (26-FEB-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 52 authorshide authors
Champion,M., Cuomo,C., Ma,L.-J., Henn,M.R., Sil,A., Goldman,B., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Klein,B., McEwen,J.G., Puccia,R., Goldman,G.H., Felipe,M.S., Nino-Vega,G., San-Blas,G., Taylor,J., Mendoza,L., Galagan,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

On Mar 17, 2009 this sequence version replaced gi:156709565.

The Histoplasma capsulatum G186AR whole genome shotgun (WGS) project has the project accession ABBS00000000. This version of the project (02) has the accession number ABBS02000000, and consists of sequences ABBS02000001-ABBS02000359.

Histoplasma is a dimorphic fungus. The mold or mycelial form exists in soil contaminated with droppings of bats or birds such as starlings or chickens, where it absorbs nutrients from dead organic matter and produces infectious spores. When these spores are inhaled and encounter the warm moist environment of the lungs, they undergo a transformation to the yeast or parasitic form. Sequencing technology: ABI 3730 Genome coverage: 11.50X (10.11X Q>20).

Contigs
Download
GenBank:ABBS02.1.gbff.gz 12.6 Mb
FASTA:ABBS02.1.fsa_nt.gz 8.9 Mb
ASN.1:ABBS02.1.bbs.gz 7.5 Mb