Sign in to NCBI
skip to main content

Sequence Set Browser

 

ABBC00000000.1 Coccidioides immitis RMSCC 3703

Master
# of Contigs: 5,033
# of Proteins: 10,463
# of Scaffolds/Chrs: 289
Total length: 25,231,528 bp
BioProject: PRJNA17761
BioSample: SAMN02953689
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Coccidioides immitis RMSCC 3703show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = RMSCC 3703
WGS: ABBC01000001:ABBC01005033
Scaffolds: DS268118:DS268406
289 scaffolds, 10,463 proteins, total length is 27,708,786 bases
Reference:
The Genome Sequence of Coccidioides immitis RMSCC 3703 : Unpublished – show 24 authorshide authors
Henn,M.R., Sykes,S., Young,S., Jaffe,D., Berlin,A., Alvarez,P., Butler,J., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Kodira,C., Alvarado,L., Zeng,Q., Crawford,M., Antoine,C., Devon,K., Galgiani,J., Orsborn,K., Lewis,M.L., Nusbaum,C., Galagan,J., Birren,B., Coccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform
Reference:
Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control : Genome Res. 20 (7), 938-946 (2010) – show 29 authorshide authors
Neafsey,D.E., Barker,B.M., Sharpton,T.J., Stajich,J.E., Park,D.J., Whiston,E., Hung,C.Y., McMahan,C., White,J., Sykes,S., Heiman,D., Young,S., Zeng,Q., Abouelleil,A., Aftuck,L., Bessette,D., Brown,A., FitzGerald,M., Lui,A., Macdonald,J.P., Priest,M., Orbach,M.J., Galgiani,J.N., Kirkland,T.N., Cole,G.T., Birren,B.W., Henn,M.R., Taylor,J.W., Rounsley,S.D.
Submission:
Submitted (29-JUN-2007) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 24 authorshide authors
Henn,M.R., Sykes,S., Young,S., Jaffe,D., Berlin,A., Alvarez,P., Butler,J., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Kodira,C., Alvarado,L., Zeng,Q., Crawford,M., Antoine,C., Devon,K., Galgiani,J., Orsborn,K., Lewis,M.L., Nusbaum,C., Galagan,J., Birren,B., Coccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform

The Coccidioides immitis RMSCC 3703 whole genome shotgun (WGS) project has the project accession ABBC00000000. This version of the project (01) has the accession number ABBC01000000, and consists of sequences ABBC01000001-ABBC01005033.

Annotation was added to the scaffolds in July 2015.

Contigs
Download
GenBank:ABBC01.1.gbff.gz 10.8 Mb
FASTA:ABBC01.1.fsa_nt.gz 7.5 Mb
ASN.1:ABBC01.1.bbs.gz 10.2 Mb