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Sequence Set Browser

 

ABBB00000000.1 Coccidioides posadasii RMSCC 3488

Master
# of Contigs: 287
# of Proteins: 9,964
# of Scaffolds/Chrs: 9
Total length: 28,086,866 bp
BioProject: PRJNA17783
BioSample: SAMN02953688
Keywords: WGS
Annotation: Scaffolds
Organism: Coccidioides posadasii RMSCC 3488show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = RMSCC 3488
WGS: ABBB01000001:ABBB01000287
Scaffolds: DS268109:DS268117
9 scaffolds, 9,964 proteins, total length is 28,211,108 bases
Reference:
The Genome Sequence of Coccidioides posadasii RMSCC_3488 : Unpublished – show 24 authorshide authors
Henn,M.R., Sykes,S., Young,S., Jaffe,D., Berlin,A., Alvarez,P., Butler,J., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Kodira,C., Alvarado,L., Zeng,Q., Crawford,M., Antoine,C., Devon,K., Galgiani,J., Orsborn,K., Lewis,M.L., Nusbaum,C., Galagan,J., Birren,B., Coccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform
Reference:
Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives : Genome Res. 19 (10), 1722-1731 (2009) – show 24 authorshide authors
Sharpton,T.J., Stajich,J.E., Rounsley,S.D., Gardner,M.J., Wortman,J.R., Jordar,V.S., Maiti,R., Kodira,C.D., Neafsey,D.E., Zeng,Q., Hung,C.Y., McMahan,C., Muszewska,A., Grynberg,M., Mandel,M.A., Kellner,E.M., Barker,B.M., Galgiani,J.N., Orbach,M.J., Kirkland,T.N., Cole,G.T., Henn,M.R., Birren,B.W., Taylor,J.W.
Reference:
Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control : Genome Res. 20 (7), 938-946 (2010) – show 29 authorshide authors
Neafsey,D.E., Barker,B.M., Sharpton,T.J., Stajich,J.E., Park,D.J., Whiston,E., Hung,C.Y., McMahan,C., White,J., Sykes,S., Heiman,D., Young,S., Zeng,Q., Abouelleil,A., Aftuck,L., Bessette,D., Brown,A., FitzGerald,M., Lui,A., Macdonald,J.P., Priest,M., Orbach,M.J., Galgiani,J.N., Kirkland,T.N., Cole,G.T., Birren,B.W., Henn,M.R., Taylor,J.W., Rounsley,S.D.
Submission:
Submitted (29-JUN-2007) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 24 authorshide authors
Henn,M.R., Sykes,S., Young,S., Jaffe,D., Berlin,A., Alvarez,P., Butler,J., Gnerre,S., Grabherr,M., Mauceli,E., Brockman,W., Kodira,C., Alvarado,L., Zeng,Q., Crawford,M., Antoine,C., Devon,K., Galgiani,J., Orsborn,K., Lewis,M.L., Nusbaum,C., Galagan,J., Birren,B., Coccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform

The Coccidioides posadasii RMSCC 3488 whole genome shotgun (WGS) project has the project accession ABBB00000000. This version of the project (01) has the accession number ABBB01000000, and consists of sequences ABBB01000001-ABBB01000287.

Annotation was added to the scaffolds in June 2015.

Contigs
Download
GenBank:ABBB01.1.gbff.gz 11.7 Mb
FASTA:ABBB01.1.fsa_nt.gz 8.3 Mb
ASN.1:ABBB01.1.bbs.gz 7.2 Mb
History
Minor Version Create Date
1 07/12/2007
6 11/10/2017
7 11/11/2017
8 11/17/2017
9 11/18/2017