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Sequence Set Browser

 

AAZX00000000.1 Nasonia vitripennis

Master
# of Contigs: 26,605
# of Proteins: 0
# of Scaffolds/Chrs: 2,212 (4 are dead)
Total length: 239,649,738 bp
BioProject: PRJNA13660
BioSample: SAMN02902141
Keywords: WGS
Organism: Nasonia vitripennisshow lineagehide lineage
Biosource:
/mol_type = genomic genomic
/strain = AsymCX
WGS: AAZX01000001:AAZX01026605
Scaffolds: CM000915:CM000919, GL340784:GL342990
2,212 scaffolds, total length is 402,582,727 bases
Reference:
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species : Science 327 (5963), 343-348 (2010) – show 164 authorshide authors
Werren,J.H., Richards,S., Desjardins,C.A., Niehuis,O., Gadau,J., Colbourne,J.K., Nasonia Genome Working Group, Werren,J.H., Richards,S., Desjardins,C.A., Niehuis,O., Gadau,J., Colbourne,J.K., Beukeboom,L.W., Desplan,C., Elsik,C.G., Grimmelikhuijzen,C.J., Kitts,P., Lynch,J.A., Murphy,T., Oliveira,D.C., Smith,C.D., van de Zande,L., Worley,K.C., Zdobnov,E.M., Aerts,M., Albert,S., Anaya,V.H., Anzola,J.M., Barchuk,A.R., Behura,S.K., Bera,A.N., Berenbaum,M.R., Bertossa,R.C., Bitondi,M.M., Bordenstein,S.R., Bork,P., Bornberg-Bauer,E., Brunain,M., Cazzamali,G., Chaboub,L., Chacko,J., Chavez,D., Childers,C.P., Choi,J.H., Clark,M.E., Claudianos,C., Clinton,R.A., Cree,A.G., Cristino,A.S., Dang,P.M., Darby,A.C., de Graaf,D.C., Devreese,B., Dinh,H.H., Edwards,R., Elango,N., Elhaik,E., Ermolaeva,O., Evans,J.D., Foret,S., Fowler,G.R., Gerlach,D., Gibson,J.D., Gilbert,D.G., Graur,D., Grunder,S., Hagen,D.E., Han,Y., Hauser,F., Hultmark,D., Hunter,H.C. IV, Hurst,G.D., Jhangian,S.N., Jiang,H., Johnson,R.M., Jones,A.K., Junier,T., Kadowaki,T., Kamping,A., Kapustin,Y., Kechavarzi,B., Kim,J., Kim,J., Kiryutin,B., Koevoets,T., Kovar,C.L., Kriventseva,E.V., Kucharski,R., Lee,H., Lee,S.L., Lees,K., Lewis,L.R., Loehlin,D.W., Logsdon,J.M. Jr., Lopez,J.A., Lozado,R.J., Maglott,D., Maleszka,R., Mayampurath,A., Mazur,D.J., McClure,M.A., Moore,A.D., Morgan,M.B., Muller,J., Munoz-Torres,M.C., Muzny,D.M., Nazareth,L.V., Neupert,S., Nguyen,N.B., Nunes,F.M., Oakeshott,J.G., Okwuonu,G.O., Pannebakker,B.A., Pejaver,V.R., Peng,Z., Pratt,S.C., Predel,R., Pu,L.L., Ranson,H., Raychoudhury,R., Rechtsteiner,A., Reese,J.T., Reid,J.G., Riddle,M., Robertson,H.M., Romero-Severson,J., Rosenberg,M., Sackton,T.B., Sattelle,D.B., Schluns,H., Schmitt,T., Schneider,M., Schuler,A., Schurko,A.M., Shuker,D.M., Simoes,Z.L., Sinha,S., Smith,Z., Solovyev,V., Souvorov,A., Springauf,A., Stafflinger,E., Stage,D.E., Stanke,M., Tanaka,Y., Telschow,A., Trent,C., Vattathil,S., Verhulst,E.C., Viljakainen,L., Wanner,K.W., Waterhouse,R.M., Whitfield,J.B., Wilkes,T.E., Williamson,M., Willis,J.H., Wolschin,F., Wyder,S., Yamada,T., Yi,S.V., Zecher,C.N., Zhang,L., Gibbs,R.A.
Submission:
Submitted (02-MAY-2007) Human Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA – show 160 authorshide authors
Jiang,H., Abraham,K., Ali,S., Alsbrooks,S.L., Anim,B.N., Anosike,U.S., Attaway,T., Bandaranaike,D.P., Battles,P.K., Bell,S.N., Bell,A.V., Beltran,B., Bickham,C., Bustamante,Y., Caleb,T., Canada,A., Cardenas,V., Carter,K., Chacko,J., Chandrabose,M.N., Chavez,D., Chavez,A., Chen,L., Chu,H.-S., Claassen,K.J., Cockrell,R., Collins,M., Cooper,J.A., Cree,A., Curry,S.M., Da,Y., Dao,M.D., Das,B., Davila,M.-L., Davy-Carroll,L., Denson,S., Dinh,H., Ebong,V.E., Edwards,J.R., Egan,A., El-Daye,J., Escobedo,L., Fernandez,S., Fernando,P.R., Flagg,N., Forbes,L.D., Fowler,R.G., Fu,Q., Gabisi,R.A., Ganer,J., Garbino pronczuk,A., Garcia iii,R.M., Garner,T., Garrett,T.E., Gonzalez,D.A., Hamid,H., Hawkins,E.S., Hirani,K., Hogues,M.E., Hollins,B., Hsiao,C.-H., Jabil,R., James,M.L., Jhangiani,S.N., Johnson,B., Johnson,Q., Joshi,V., Kalu,J.B., Kam,C., Kashfia,A., Keebler,J., Kisamo,H., Kovar,C.L., Lago,L.A., Lai,C.-Y., Laidlaw,J., Lara,F., Le,T.-K., Lee,S.L., Legall iii,F.H., Lemon,S.J., Lewis,L.R., Li,B., Liu,Y., Liu,Y.-S., Lopez,J., Lozado,R.J., Lu,J., Madu,R.C., Maheshwari,M., Maheshwari,R., Malloy,K., Martinez,E., Mathew,T., Mercado,I.C., Mercado,C., Meyer,B., Montgomery,K., Morgan,M.B., Munidasa,M., Nazareth,L.V., Nelson,J., Ng,B.M., Nguyen,N.B., Nguyen,P.Q., Nguyen,T., Obregon,M., Okwuonu,G.O., Onwere,C.G., Orozco,G., Parra,A., Patel,S., Patil,S., Perez,A., Perez,Y., Pham,C., Primus,E.L., Pu,L.-L., Puazo,M., Qin,X., Quiroz,J.B., Reese,J., Richards,S., Rives,C.M., Robberts,R., Ruiz,Sj., Ruiz,M.J., Santibanez,J., Schneider,B.W., Sisson,I., Smith,M., Sodergren,E., Song,X.-Z., Song,Bb., Summersgill,H., Thelus,R., Thornton,R.D., Trejos,Z.Y., Usmani,K., Vattathil,S., Villasana,D., Walker,D.L., Wang,S., Wang,K., White,C.S., Williams,A.C., Williamson,J., Wilson,K., Woghiren,I.O., Woodworth,J.R., Worley,K.C., Wright,R.A., Wu,W., Young,L., Zhang,L., Zhang,J., Zhu,Y., Muzny,D.M., Weinstock,G., Gibbs,R.A.
Submission:
Submitted (17-AUG-2012) Human Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA – show 160 authorshide authors
Jiang,H., Abraham,K., Ali,S., Alsbrooks,S.L., Anim,B.N., Anosike,U.S., Attaway,T., Bandaranaike,D.P., Battles,P.K., Bell,S.N., Bell,A.V., Beltran,B., Bickham,C., Bustamante,Y., Caleb,T., Canada,A., Cardenas,V., Carter,K., Chacko,J., Chandrabose,M.N., Chavez,D., Chavez,A., Chen,L., Chu,H.-S., Claassen,K.J., Cockrell,R., Collins,M., Cooper,J.A., Cree,A., Curry,S.M., Da,Y., Dao,M.D., Das,B., Davila,M.-L., Davy-Carroll,L., Denson,S., Dinh,H., Ebong,V.E., Edwards,J.R., Egan,A., El-Daye,J., Escobedo,L., Fernandez,S., Fernando,P.R., Flagg,N., Forbes,L.D., Fowler,R.G., Fu,Q., Gabisi,R.A., Ganer,J., Garbino pronczuk,A., Garcia iii,R.M., Garner,T., Garrett,T.E., Gonzalez,D.A., Hamid,H., Hawkins,E.S., Hirani,K., Hogues,M.E., Hollins,B., Hsiao,C.-H., Jabil,R., James,M.L., Jhangiani,S.N., Johnson,B., Johnson,Q., Joshi,V., Kalu,J.B., Kam,C., Kashfia,A., Keebler,J., Kisamo,H., Kovar,C.L., Lago,L.A., Lai,C.-Y., Laidlaw,J., Lara,F., Le,T.-K., Lee,S.L., Legall iii,F.H., Lemon,S.J., Lewis,L.R., Li,B., Liu,Y., Liu,Y.-S., Lopez,J., Lozado,R.J., Lu,J., Madu,R.C., Maheshwari,M., Maheshwari,R., Malloy,K., Martinez,E., Mathew,T., Mercado,I.C., Mercado,C., Meyer,B., Montgomery,K., Morgan,M.B., Munidasa,M., Nazareth,L.V., Nelson,J., Ng,B.M., Nguyen,N.B., Nguyen,P.Q., Nguyen,T., Obregon,M., Okwuonu,G.O., Onwere,C.G., Orozco,G., Parra,A., Patel,S., Patil,S., Perez,A., Perez,Y., Pham,C., Primus,E.L., Pu,L.-L., Puazo,M., Qin,X., Quiroz,J.B., Reese,J., Richards,S., Rives,C.M., Robberts,R., Ruiz,Sj., Ruiz,M.J., Santibanez,J., Schneider,B.W., Sisson,I., Smith,M., Sodergren,E., Song,X.-Z., Song,Bb., Summersgill,H., Thelus,R., Thornton,R.D., Trejos,Z.Y., Usmani,K., Vattathil,S., Villasana,D., Walker,D.L., Wang,S., Wang,K., White,C.S., Williams,A.C., Williamson,J., Wilson,K., Woghiren,I.O., Woodworth,J.R., Worley,K.C., Wright,R.A., Wu,W., Young,L., Zhang,L., Zhang,J., Zhu,Y., Muzny,D.M., Weinstock,G., Gibbs,R.A.

The Nasonia vitripennis whole genome shotgun (WGS) project has the project accession AAZX00000000. This version of the project (01) has the accession number AAZX01000000, and consists of sequences AAZX01000001-AAZX01026605.

##Genome-Assembly-Data-START##
Assembly Method : Atlas-overlapper v. 2008; Phrap; Atlas-scaffold
Assembly Name : Nvit_2.1
Genome Coverage : 6x
Sequencing Technology : ABI
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AAZX01.1.gbff.gz 89.6 Mb
 AAZX01.2.gbff.gz 22.2 Mb
FASTA:AAZX01.1.fsa_nt.gz 55.3 Mb
 AAZX01.2.fsa_nt.gz 13.1 Mb
ASN.1:AAZX01.1.bbs.gz 63.4 Mb
 AAZX01.2.bbs.gz 21.4 Mb
History
Minor Version Create Date
1 05/04/2007
7 11/10/2017
8 11/17/2017