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Sequence Set Browser

 

AAPY00000000.1 Tupaia belangeri

Master
# of Contigs: 841,006
# of Proteins: 0
Total length: 2,137,225,476 bp
BioProject: PRJNA13971
BioSample: SAMN03004381
Keywords: WGS
Annotation: Contigs
Organism: Tupaia belangerishow lineagehide lineage
Biosource:
/country = Germany:Clinical Neurobiology Laboratory, Deutsches Primatenzentrum German Primate Center, Gottingen
/mol_type = genomic genomic
/sex = female
/specimen_voucher = Broad Sequencing Sample 10448
WGS: AAPY01000001:AAPY01841006
Reference:
Annotating the human genome using low coverage mammalian genomes : Unpublished – show 6 authorshide authors
Lindblad-Toh,K., Chang,J.L., Gnerre,S., Clamp,M., Lander,E.S., The Genome Sequencing Platform, The Genome Assembly Team
Submission:
Submitted (01-MAY-2006) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA – show 6 authorshide authors
Lindblad-Toh,K., Chang,J.L., Gnerre,S., Clamp,M., Lander,E.S., The Genome Sequencing Platform, The Genome Assembly Team

The Tupaia belangeri whole genome shotgun (WGS) project has the project accession AAPY00000000. This version of the project (01) has the accession number AAPY01000000, and consists of sequences AAPY01000001-AAPY01841006.

This version of the project represents approximately 2x coverage of the genome. Some bases are marked as zero quality to reflect high-quality base mismatches in the assembled reads. Such mismatch may be due to allelic differences within the sequenced individual or low frequency duplicated sequences in the species. At the low coverage level (2x) of this assembly, these two causes are not distinguishable.

Contigs
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