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Sequence Set Browser

 

AAKM00000000.1 Plasmodium vivax

Master
# of Contigs: 2,770 (7 are dead)
# of Proteins: 5,389
# of Scaffolds/Chrs: 2,747
Total length: 27,977,883 bp
BioProject: PRJNA150
BioSample: SAMN02953638
Keywords: WGS
Annotation: Contigs
Organism: Plasmodium vivaxshow lineagehide lineage
Biosource:
/isolate = Salvador I
/mol_type = genomic genomic
WGS: AAKM01000001:AAKM01002770
Scaffolds: CM000442:CM000455, DS480727:DS483459
2,747 scaffolds, total length is 27,007,701 bases
Reference:
Comparative genomics of the neglected human malaria parasite Plasmodium vivax : Nature 455 (7214), 757-763 (2008) – show 40 authorshide authors
Carlton,J.M., Adams,J.H., Silva,J.C., Bidwell,S.L., Lorenzi,H., Caler,E., Crabtree,J., Angiuoli,S.V., Merino,E.F., Amedeo,P., Cheng,Q., Coulson,R.M., Crabb,B.S., Del Portillo,H.A., Essien,K., Feldblyum,T.V., Fernandez-Becerra,C., Gilson,P.R., Gueye,A.H., Guo,X., Kang'a,S., Kooij,T.W., Korsinczky,M., Meyer,E.V., Nene,V., Paulsen,I., White,O., Ralph,S.A., Ren,Q., Sargeant,T.J., Salzberg,S.L., Stoeckert,C.J., Sullivan,S.A., Yamamoto,M.M., Hoffman,S.L., Wortman,J.R., Gardner,M.J., Galinski,M.R., Barnwell,J.W., Fraser-Liggett,C.M.
Submission:
Submitted (19-SEP-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA – Carlton,J.
Submission:
Submitted (08-SEP-2006) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA – Carlton,J.

The Plasmodium vivax whole genome shotgun (WGS) project has the project accession AAKM00000000. This version of the project (01) has the accession number AAKM01000000, and consists of sequences AAKM01000001-AAKM01002770.

FIRST DRAFT ASSEMBLY. May contain errors. The number of contigs is less than the number of accession numbers because some contigs have been replaced by others.

Annotation was added to the contigs in June 2007.

Contigs
Proteins
Download
GenBank:AAKM01.1.gbff.gz 13.9 Mb
FASTA:AAKM01.1.fsa_nt.gz 7.8 Mb
ASN.1:AAKM01.1.bbs.gz 9.4 Mb