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Sequence Set Browser

 

AAIH00000000.2 Aspergillus flavus NRRL3357

Master
# of Contigs: 3,388 (2430 are dead)
# of Proteins: 13,485
# of Scaffolds/Chrs: 2,761 (2430 are dead)
Total length: 39,911,347 bp
BioProject: PRJNA13284
BioSample: SAMN02953629
Keywords: WGS
Annotation: Scaffolds
Organism: Aspergillus flavus NRRL3357show lineagehide lineage
Biosource:
/mol_type = genomic genomic
/strain = NRRL3357
WGS: AAIH02000001:AAIH02003388
Scaffolds: EQ963472:EQ966232
2,761 scaffolds, 13,485 proteins, total length is 36,892,344 bases
Reference:
Genome Sequence of Aspergillus flavus NRRL 3357, a Strain That Causes Aflatoxin Contamination of Food and Feed : Genome Announc 3 (2) (2015) – show 9 authorshide authors
Nierman,W.C., Yu,J., Fedorova-Abrams,N.D., Losada,L., Cleveland,T.E., Bhatnagar,D., Bennett,J.W., Dean,R., Payne,G.A.
Submission:
Submitted (16-JUN-2005) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA – Nierman,W.C.
Submission:
Submitted (16-AUG-2007) J. Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA – Nierman,W.C.

On Aug 20, 2007 this sequence version replaced gi:71564281.

The Aspergillus flavus NRRL3357 whole genome shotgun (WGS) project has the project accession AAIH00000000. This version of the project (02) has the accession number AAIH02000000, and consists of sequences AAIH02000001-AAIH02003388.

Annotated scaffolds were added in January 2009. The initial genome submission contained 3388 contigs assembled into 2761 scaffolds, but 2430 of those contigs and their scaffolds were suppressed in September 2010 because they were determined to be contaminants. Therefore, the current genome assembly, GCA_000006275.2, consists of 958 contigs assembled into 331 scaffolds. The assembly details are available in the Assembly resource: http://www.ncbi.nlm.nih.gov/assembly/GCA_000006275.2.

##Genome-Assembly-Data-START##
Assembly Name : JCVI-afl1-v2.0
Genome Coverage : 5x
Sequencing Technology : Sanger
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:AAIH02.1.gbff.gz 15.6 Mb
FASTA:AAIH02.1.fsa_nt.gz 11 Mb
ASN.1:AAIH02.1.bbs.gz 8.8 Mb