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AAGI00000000.1 Parastagonospora nodorum SN15
# of Contigs: 496 (3 are dead) # of Proteins: 15,983 # of Scaffolds/Chrs: 109 (2 are dead) Total length: 37,071,111 bp BioProject: PRJNA13754 BioSample: SAMN02953619 Keywords: WGS Annotation: Contigs, Scaffolds Organism: Parastagonospora nodorum SN15 – show lineagehide lineage Biosource:/mol_type = genomic/strain = SN15 WGS: AAGI01000001:AAGI01000496 Scaffolds: CH445325:CH445394, CH959327:CH959365109 scaffolds, 15,983 proteins, total length is 37,164,226 bases Reference:Annotation of the Phaeosphaeria nodorum SN15 genome : Unpublished – show 32 authorshide authorsBirren,B., Lander,E., Galagan,J., Devon,K., Nusbaum,C., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., Brockman,W., Rounsley,S., Young,S., LaButti,K., Pushparaj,V., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Kodira,C., Zeng,Q., Yandava,C., Alvarado,L., Oleary,S., Oliver,R.O., Solomon,P., The Broad Institute Genome Sequencing Platform Submission:Submitted (29-MAR-2005) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA – Lander,E., Birren,B., The Genome Sequencing Platform, The Genome Assembly Team Submission:Submitted (29-MAR-2005) Murdoch University, South Street, Perth, WA 6150, Australia – Oliver,R., Solomon,P.
The Parastagonospora nodorum SN15 whole genome shotgun (WGS) project has the project accession AAGI00000000. This version of the project (01) has the accession number AAGI01000000, and consists of sequences AAGI01000001-AAGI01000496.
The mitochondrial genome is GenBank Accession Number EU053989, so the mitochondrial WGS sequences (contigs AAGI01000440, AAGI01000441 and AAGI01000412; and scaffolds CH445385 and CH959327) were removed from this project. This project was sequenced and assembled by the Broad Institute of Harvard/MIT, and Calhoun annotation was added to the scaffolds in July 2006 by the Broad. The annotation was updated in November 2007 by the Australian Centre for Necrotrophic Fungal Pathogens (ACNFP), based on additional EST evidence and retrained gene predictions. The ACNFP is responsible for the assembled genome sequence and annotation.