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Sequence Set Browser

 

AAFO00000000.1 Candida albicans WO-1

Master
# of Contigs: 86
# of Proteins: 5,752
# of Scaffolds/Chrs: 22 (5 are dead)
Total length: 14,416,413 bp
BioProject: PRJNA16373
BioSample: SAMN02953609
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Candida albicans WO-1show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = WO-1
WGS: AAFO01000001:AAFO01000086
Scaffolds: CH672346:CH672354, CM000309:CM000313, GG670278:GG670285
22 scaffolds, 5,752 proteins, total length is 14,472,953 bases
Reference:
Evolution of pathogenicity and sexual reproduction in eight Candida genomes : Nature 459 (7247), 657-662 (2009) – show 51 authorshide authors
Butler,G., Rasmussen,M.D., Lin,M.F., Santos,M.A., Sakthikumar,S., Munro,C.A., Rheinbay,E., Grabherr,M., Forche,A., Reedy,J.L., Agrafioti,I., Arnaud,M.B., Bates,S., Brown,A.J., Brunke,S., Costanzo,M.C., Fitzpatrick,D.A., de Groot,P.W., Harris,D., Hoyer,L.L., Hube,B., Klis,F.M., Kodira,C., Lennard,N., Logue,M.E., Martin,R., Neiman,A.M., Nikolaou,E., Quail,M.A., Quinn,J., Santos,M.C., Schmitzberger,F.F., Sherlock,G., Shah,P., Silverstein,K.A., Skrzypek,M.S., Soll,D., Staggs,R., Stansfield,I., Stumpf,M.P., Sudbery,P.E., Srikantha,T., Zeng,Q., Berman,J., Berriman,M., Heitman,J., Gow,N.A., Lorenz,M.C., Birren,B.W., Kellis,M., Cuomo,C.A.
Submission:
Submitted (20-MAR-2006) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA – show 35 authorshide authors
Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Cuomo,C., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., Brockman,W., MacCallum,I.A., Rounsley,S., Young,S., LaButti,K., Pushparaj,V., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., Luoma,S., White,J., Kodira,C., Oleary,S., Yandava,C., Zeng,Q., Alvarado,L., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (20-MAR-2006) Department of Biological Sciences, University of Iowa, Iowa City, IA 52242, USA – Soll,D.R., Srikantha,T.

The Candida albicans WO-1 whole genome shotgun (WGS) project has the project accession AAFO00000000. This version of the project (01) has the accession number AAFO01000000, and consists of sequences AAFO01000001-AAFO01000086.

The number of scaffolds is less than the number of accession numbers because some have been replaced by chromosome scaffolds. Annotation was added to the scaffolds in June 2009.

Contigs
Download
GenBank:AAFO01.1.gbff.gz 5.8 Mb
FASTA:AAFO01.1.fsa_nt.gz 4.2 Mb
ASN.1:AAFO01.1.bbs.gz 4.3 Mb