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Sequence Set Browser

 

AADD00000000.1 Homo sapiens

Master
# of Contigs: 211,493
# of Proteins: 0
# of Scaffolds/Chrs: 1,372
Total length: 2,695,614,880 bp
BioProject: PRJNA1431
BioSample: SAMN02981219
Keywords: WGS
Organism: Homo sapiensshow lineagehide lineage
Biosource:
/mol_type = genomic
WGS: AADD01000001:AADD01211493
Scaffolds: CH003448:CH003471, KE137324:KE138671
1,372 scaffolds, total length is 2,851,996,681 bases
Reference:
Whole-genome shotgun assembly and comparison of human genome assemblies : Proc. Natl. Acad. Sci. U.S.A. 101 (7), 1916-1921 (2004) – show 36 authorshide authors
Istrail,S., Sutton,G.G., Florea,L., Halpern,A.L., Mobarry,C.M., Lippert,R., Walenz,B., Shatkay,H., Dew,I., Miller,J.R., Flanigan,M.J., Edwards,N.J., Bolanos,R., Fasulo,D., Halldorsson,B.V., Hannenhalli,S., Turner,R., Yooseph,S., Lu,F., Nusskern,D.R., Shue,B.C., Zheng,X.H., Zhong,F., Delcher,A.L., Huson,D.H., Kravitz,S.A., Mouchard,L., Reinert,K., Remington,K.A., Clark,A.G., Waterman,M.S., Eichler,E.E., Adams,M.D., Hunkapiller,M.W., Myers,E.W., Venter,J.C.
Submission:
Submitted (25-NOV-2003) Celera, 45 W Gude Drive, Rockville, MD 20850, USA – show 36 authorshide authors
Istrail,S., Sutton,G., Florea,L., Halpern,A.L., Mobarry,C.M., Lippert,R., Walenz,B., Shatkay,H., Dew,I., Miller,J.R., Flanigan,M.J., Edwards,N.J., Bolanos,R., Fasulo,D., Halldorsson,B.V., Hannenhalli,S., Turner,R., Yooseph,S., Lu,F., Nusskern,D.R., Shue,B.C., Zheng,X.H., Zhong,F., Delcher,A.L., Huson,D.H., Kravitz,S.A., Mouchard,L., Reinert,K., Remington,K.A., Clark,A.G., Waterman,M.S., Eichler,E.E., Adams,M.D., Hunkapiller,M.W., Myers,E.W., Venter,J.C.

The Homo sapiens whole genome shotgun (WGS) project has the project accession AADD00000000. This version of the project (01) has the accession number AADD01000000, and consists of sequences AADD01000001-AADD01211493.

This is the December 2001 whole genome shotgun assembly (WGSA) of the human genome. It was generated by the Celera Assembler applied to shotgun data only: the 27 million reads of Celera's 5.3X whole genome shotgun data and 104,000 BAC end sequence pairs from GenBank from other human genome projects (Nature 1996. 381:364-366; Genomics 2000. 63:321-332). It relied on Celera's paired reads and the BAC end reads for long range order and orientation. Its scaffolds were mapped to chromosomes using STS maps.

Contigs
Download
GenBank:AADD01.1.gbff.gz 211.1 Mb
 AADD01.2.gbff.gz 211.2 Mb
 AADD01.3.gbff.gz 211 Mb
 AADD01.4.gbff.gz 211.1 Mb
 AADD01.5.gbff.gz 210.1 Mb
 AADD01.6.gbff.gz 86.9 Mb
ASN.1:AADD01.1.bbs.gz 114.6 Mb
 AADD01.2.bbs.gz 114.6 Mb
 AADD01.3.bbs.gz 114.5 Mb
 AADD01.4.bbs.gz 114.5 Mb
 AADD01.5.bbs.gz 114.1 Mb
 AADD01.6.bbs.gz 48.6 Mb