Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy BioCollections
   
Taxonomy browser (Xenopus)

Xenopus 1)

Taxonomy ID: 8353 (for references in articles please use NCBI:txid8353)
current name
Xenopus 1)
NCBI BLAST name: frogs & toads
Rank: genus
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae
   Entrez records   
Database name Subtree links Direct links
Nucleotide 2,965,331 14
Protein 278,633 41
Structure 609 3
Genome 3 -
Popset 231 57
Conserved Domains 1 -
GEO Datasets 7,140 -
PubMed Central 74,722 74,437
Gene 94,509 -
HomoloGene 14,412 -
SRA Experiments 8,539 -
GEO Profiles 184,986 -
Protein Clusters 12 -
Identical Protein Groups 172,625 29
BioProject 587 2
BioSample 8,154 -
Assembly 10 -
PubChem BioAssay 1,034 45
Taxonomy 81 1

Notes:

Comments and References:

Cannatella & Trueb (1988)
Cannatella,D.C and Trueb,L. "Evolution of Pipoid Frogs: Intergeneric Relationships of the Aquatic Frog Family Pipidae (Anura)" Zoological Journal of the Linnean Society 94 (1): 1-38 (1988) [Xenopus tropicalis and epitropicalis transferred to Silurana]
de Sa and Hillis (1990)
de Sa, R.O. and D.M. Hillis (1990). Phylogenetic relationships of the pipid frogs Xenopus and Silurana: an integration of ribosomal DNA and morphology. Mol. Biol. Evol. 7 (4): 365-376. The genus Silurana was resurrected by Cannatella and Trueb (1988) to accomodate the species in the Xenopus tropicalis group. Cannatella and Trueb (1988) believed the members of the Xenopus tropicalis group were more closely related to Hymenochirus, Pipa, and Pseudhymenochirus than they were to to other species of Xenopus. de Sa and Hillis (1990) refuted this phylogenetic placement of the Xenopus tropicalis group; instead, they found that Xenopus tropicalis and Xenopus epitropicalis were more closely related to other Xenopus than to Hymenochirus, Pipa, and Pseudhymenochirus. de Sa and Hillis also noted that Xenopus tropicalis and X. epitropicalis are sister-species, forming a monophyletic group which can be recognized as the genus Silurana. Silurana and Xenopus are recognized as sister-taxa, forming the subfamily Xenopodinae. Hymenochirus, Pipa, and Pseudhymenochirus remain in the subfamily Pipinae. The Xenopodinae and Pipinae constitute the Pipidae.
Cannatella & De Sa (1993)
Cannatella,D.C. and de Sa,R. "Xenopus laevis as a model organism." Systematic Biology 42 (4) 476-507 (1993)

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Xenopus taxonomy/phylogenetic AmphibiaWeb
Xenopus Wagler, 1827 taxonomy/phylogenetic Amphibian Species of the World
Xenopus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Xenopus taxonomy/phylogenetic Barcodes of Life
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Xenopus Wagler, 1827 taxonomy/phylogenetic Integrated Taxonomic Information System
Xenopus taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Xenopus Wagler, 1827 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]