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Taxonomy browser (Yersinia pestis KIM10+)

Yersinia pestis KIM10+

Taxonomy ID: 187410 (for references in articles please use NCBI:txid187410)
Scientific name: Yersinia pestis KIM10+
Inherited blast name: enterobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: Yersinia pestis KIM
equivalent name: Yersinia pestis str. KIM10+
equivalent name: Yersinia pestis strain KIM10+
Lineage( abbreviated )
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
   Entrez records   
Database name Subtree links Direct links
Nucleotide 328 314
Protein 13,249 8,606
Structure 5 4
Genome 1 1
GEO Datasets 1 1
PubMed Central 48 48
Gene 4,451 4,451
SRA Experiments 5 1
Identical Protein Groups 7,203 5,883
Bio Project 3 2
Bio Sample 7 2
Bio Systems 282 282
Assembly 2 1
Probe 80 80
Taxonomy 2 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentDeng W et al. (2002)
Deng, W., Burland, V., Plunkett, G. 3rd, Boutin, A., Mayhew, G.F., Liss, P., Perna, N.T., Rose, D.J., Mau, B., Zhou, S., Schwartz, D.C., Fetherston, J.D., Lindler, L.E., Brubaker, R.R., Plano, G.V., Straley, S.C., McDonough, K.A., Nilles, M.L., Matson, J.S., Blattner, F.R., and Perry, R.D. "Genome sequence of Yersinia pestis KIM." J. Bacteriol. (2002) 184:4601-4611.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
TIGR_JCVIJTC - The Institute for Genomic Research, Traces generated at JCVIJTC
98 98
Totals per type
98 98

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Yersinia pestisKIM organism-specific BioCyc
GOLD: Go0000682 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
637000352: Yersinia pestis sv. Mediaevalis KIM 10 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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