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Taxonomy browser (Shewanella oneidensis)

Shewanella oneidensis

Taxonomy ID: 70863 (for references in articles please use NCBI:txid70863)
current name
Shewanella oneidensis Venkateswaran et al. 1999 emend. Thorell et al. 2019
type strain of Shewanella oneidensis: ATCC:700550, CIP:106686, BCCM/LMG:19005, personal::MR-1
includes:
Shewanella putrefaciens MR-1
Shewanella sp. SCH0401
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 2,384 1,868 19
Protein 18,569 8,767 -
Structure 181 54 -
Genome 1 1 -
Popset 9 9 -
GEO Datasets 563 168 -
PubMed Central 3,478 3,478 -
Gene 5,083 1 -
SRA Experiments 696 549 -
Protein Clusters 3,526 3,526 -
Identical Protein Groups 9,263 8,951 -
BioProject 128 65 -
BioSample 342 250 204
Assembly 8 5 4
PubChem BioAssay 5 3 -
Taxonomy 2 1 -

Comments and References:

image:Shewanella oneidensis
Thorell K et al. (2019)
Thorell, K., Meier-Kolthoff, J.P., Sjöling, Å, and Martín-Rodríguez, A.J. "Whole-genome sequencing redefines Shewanella taxonomy." Front. Microbiol. (2019) 10:1861.
Venkateswaran K et al. (1999)
Venkateswaran, K., Moser, D.P., Dollhopf, M.E., Lies, D.P., Saffarini, D.A., MacGregor, B.J., Ringelberg, D.B., White, D.C., Nishijima, M., Sano, H., Burghardt, J., Stackebrandt, E., and Nealson, K.H. "Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov." Int. J. Syst. Bacteriol. (1999) 49:705-724.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Shewanella oneidensis meta-databases BacDive
Shewanella oneidensis Venkateswaran et al. 1999 taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Shewanella oneidensis culture/stock collections Global Catalogue of Microorganisms
637000258: Shewanella oneidensis MR-1 organism-specific Integrated Microbial Genomes
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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