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Taxonomy browser (Rhodopseudomonas palustris BisB18)

Rhodopseudomonas palustris BisB18

Taxonomy ID: 316056 (for references in articles please use NCBI:txid316056)
Scientific name: Rhodopseudomonas palustris BisB18
Inherited blast name: a-proteobacteria
Rank: no rank
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
equivalent name: Rhodopseudomonas palustris str. BisB18
equivalent name: Rhodopseudomonas palustris strain BisB18
Lineage( abbreviated )
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas
   Entrez records   
Database name Direct links
Nucleotide 70
Protein 10,097
Structure 4
Genome 1
PubMed Central 3
Gene 5,017
Identical Protein Groups 5,591
Bio Project 2
Bio Sample 1
Bio Systems 237
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.

Reference to PubMed documentOda Y et al. (2008)
Oda, Y., Larimer, F.W., Chain, P.S., Malfatti, S., Shin, M.V., Vergez, L.M., Hauser, L., Land, M.L., Braatsch, S., Beatty, J.T., Pelletier, D.A., Schaefer, A.L., and Harwood, C.S. "Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments." Proc. Natl. Acad. Sci. USA (2008) 105:18543-18548.


Genome Information

   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
JGI - Joint Genome Institute, U.S. Department of Energy
59,525 59,525
Totals per type
59,525 59,525

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Rhodopseudomonas palustrisBisB18 organism-specific BioCyc
GOLD: Go0000373 organism-specific Genomes On Line Database
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
637000237: Rhodopseudomonas palustris BisB18 organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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