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Taxonomy browser (Orientia tsutsugamushi str. Ikeda)

Orientia tsutsugamushi str. Ikeda

Taxonomy ID: 334380 (for references in articles please use NCBI:txid334380)
current name
Orientia tsutsugamushi str. Ikeda
Orientia tsutsugamushi Ikeda
Orientia tsutsugamushi strain Ikeda
NCBI BLAST name: a-proteobacteria
Rank: strain
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( abbreviated )
Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Orientia
   Entrez records   
Database name Direct links
Nucleotide 7
Protein 3,534
Structure 4
Genome 1
Gene 4,367
Identical Protein Groups 2,002
BioProject 2
BioSample 1
Assembly 1
Taxonomy 1

Comments and References:

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.
Nakayama K et al. (unpublished_2005)
Nakayama, K., Yamashita, A., Kurokawa, K., Morimoto, T., Ogawa, M., Ohnishi, M., Fukuhara, M., Urakami, H., Ogura, Y., Ooka, T., Oshima, K., Tamura, A., Hattori, M., and Hayashi, T. "Complete genome sequence of Orientia tsutsugamushi." Unpublished (as of 27 June 2005)

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Orientia tsutsugamushi Ikeda organism-specific BioCyc
GOLD: Go0003862 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
642555145: Orientia tsutsugamushi sv. Gilliam Ikeda organism-specific Integrated Microbial Genomes
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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