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Taxonomy browser (Bacillus subtilis)

Bacillus subtilis

Taxonomy ID: 1423 (for references in articles please use NCBI:txid1423)
Scientific name: Bacillus subtilis (Ehrenberg 1835) Cohn 1872
type strain of Bacillus subtilis: ATCC:6051
type strain of Bacillus subtilis: ATCC:6051-U
type strain of Bacillus subtilis: BCRC:10255
type strain of Bacillus subtilis: CCM:2216
type strain of Bacillus subtilis: CCUG:163 B
type strain of Bacillus subtilis: CFBP:4228
type strain of Bacillus subtilis: CIP:52.65
type strain of Bacillus subtilis: DSM:10
type strain of Bacillus subtilis: IAM:12118
type strain of Bacillus subtilis: IFO:13719
type strain of Bacillus subtilis: IFO:16412
type strain of Bacillus subtilis: IMET:10758
type strain of Bacillus subtilis: JCM:1465
type strain of Bacillus subtilis: BCCM/LMG:7135
type strain of Bacillus subtilis: NBRC:13719
type strain of Bacillus subtilis: NBRC:16412
type strain of Bacillus subtilis: NCAIM B.01095
type strain of Bacillus subtilis: NCCB:32009
type strain of Bacillus subtilis: NCCB:53016
type strain of Bacillus subtilis: NCCB:70064
type strain of Bacillus subtilis: NCDO:1769
type strain of Bacillus subtilis: NCIMB:3610
type strain of Bacillus subtilis: NCTC:3610
type strain of Bacillus subtilis: NRRL:B:4219
type strain of Bacillus subtilis: NRRL:NRS:1315
type strain of Bacillus subtilis: NRRL:NRS:744
type strain of Bacillus subtilis: VKM:B:501
type strain of Bacillus subtilis: personal::168
type strain of Bacillus subtilis: PNCM:1514
homotypic synonym: "Vibrio subtilis" Ehrenberg 1835, effective name 1)
includes: Arthrobacter sp. CHR2P1B1-M
includes: Bacillus sp. 10405
includes: Bacillus sp. 15:2
includes: Bacillus sp. AECSB01
includes: Bacillus sp. AECSB04
includes: Bacillus sp. AECSB05
includes: Bacillus sp. AECSB06
includes: Bacillus sp. AECSB07
includes: Bacillus sp. AECSB08
includes: Bacillus sp. AECSB12
includes: Bacillus sp. AECSB13
includes: Bacillus sp. AECSB14
includes: Bacillus sp. HE08
includes: Bacillus sp. BS4(2013)
includes: Bacillus sp. BV3
includes: Bacillus sp. BV5
includes: Bacillus sp. BS9(2013)
includes: Bacillus sp. JKR21
includes: Bacillus sp. LB002
includes: Bacillus sp. LKM-BL
includes: Bacillus sp. PW16b
includes: Bacillus sp. PW19
includes: Bacillus sp. RSP-GLU
includes: Bacillus sp. S2 BC-1
includes: Bacillus sp. SWI06
includes: Bacillus sp. UMX-03
includes: Brevibacillus sp. BHR3P2B5-M
Inherited blast name: firmicutes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
synonym: Bacillus natto
synonym: Bacillus uniflagellatus
in-part: Bacillus mesentericus
in-part: Bacillus subtilis/Bacillus globigii
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group
   Entrez records   
Database name Subtree links Direct links
Nucleotide 44,128 34,065
Nucleotide GSS 47 47
Protein 953,086 591,544
Structure 1,594 1,113
Genome 1 1
Popset 1,711 1,700
Conserved Domains 11 7
GEO Datasets 3,000 1,915
PubMed Central 36,341 36,262
Gene 60,082 53
SRA Experiments 1,421 794
GEO Profiles 12,300 12,300
Protein Clusters 4,694 4,694
Identical Protein Groups 228,209 197,490
Bio Project 473 271
Bio Sample 2,350 1,546
Bio Systems 4,343 281
Assembly 228 121
Probe 643 634
PubChem BioAssay 3,126 2,882
Taxonomy 84 1

Notes:

Comments and References:

Cohn F (1872)
Cohn, F. "Untersuchungen uber Bakterien." Beitrage zur Biologie der Pflanzen, 1875 1 (Heft 2) (1872) 1:127-224. [No PubMed record available.]

Ehrenberg CG (1835)
Ehrenberg, C.G. "Dritter Beitrag zur Erkenntniss grosser Organisation in der Richtung des kleinsten Raumes." Physikalische Abhandlungen der Koeniglichen Akademie der Wissenschaften zu Berlin aus den Jahren 1833-1835 (1835). pp.143-336. [No PubMed record available.]

Reference to PubMed documentFritze D & Pukall R (2001)
Fritze, D., and Pukall, R. "Reclassification of bioindicator strains Bacillus subtilis DSM 675 and Bacillus subtilis DSM 2277 as Bacillus atrophaeus." Int. J. Syst. Evol. Microbiol. (2001) 51:35-7.

Nota BeneSkerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]

genome sequence
Determination of the DNA genome sequence of this strain has been or is being determined either in whole or in part.


External Information Resources (NCBI LinkOut)

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9 records from this provider organism-specific BioCyc
Bacillus subtilis taxonomy/phylogenetic Encyclopedia of life
50 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Bacillus subtilis culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
60 records from this provider organism-specific Integrated Microbial Genomes
Bacillus subtilis taxonomy/phylogenetic Lifemap
SubtiList taxonomy/phylogenetic NCBI taxonomy bookmarks
Bacillus subtilis (taxon passport) culture/stock collections StrainInfo
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Bacillus subtilis taxonomy/phylogenetic TreeBase
Bacillus subtilis Cohen, 1872 taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
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