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Taxonomy browser (Equus caballus)

Equus caballus

Taxonomy ID: 9796 (for references in articles please use NCBI:txid9796)
Scientific name: Equus caballus
current: Equus caballus
Genbank common name: horse
Inherited blast name: odd-toed ungulates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Equus przewalskii f. caballus
synonym: Equus przewalskii forma caballus
common name: domestic horse
common name: equine
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
   Entrez records   
Database name Direct links
Nucleotide 178,934
Nucleotide EST 37,756
Nucleotide GSS 316,740
Protein 77,214
Structure 329
Genome 1
Popset 330
GEO Datasets 1,404
UniGene 9,411
PubMed Central 1,904
Gene 43,360
SRA Experiments 4,199
Protein Clusters 13
Identical Protein Groups 55,029
Bio Project 220
Bio Sample 4,446
Bio Systems 492
Assembly 4
Clone DB 163,628
Probe 8,991
PubChem BioAssay 565
Taxonomy 1
Taxonomy 1

Comments and References:

From Mammal Species of the World (Smithsonian Inst. Press):

"Horses have been assigned to two different species, E. caballus (including
ferus and gmelini) and E. przewalskii, but recent authors include przewalskii
in caballus; see Corbet (1978ref:194), Groves (1974 ref), and Bennett (1980ref).
Groves (1971ref) and Corbet (1978ref:194) proposed that ferus replace caballus,
objecting to the use of specific names based on domestic animals. Gromov and
Baranova (1981ref:333-334) continued to recognizetwo species, gmelini and
przewalskii."


Genome Information

Go to NCBI genomic BLAST page for Equus caballus
Genome view: 33 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 X Y
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND EST OTHER PCR PRIMERWALK SHOTGUN TRANSPOSON WGS ALL
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
5,237 - - - - - - - 5,237
BI - Broad Insititute
- - 288 112 112 44,544 3,904 30,819,855 30,868,815
GBF - German Research Centre for Biotechnology
305,112 - - - - - - - 305,112
NISC - NIH Intramural Sequencing Center
- - - - - 595,475 - - 595,475
UGALGB - Laboratory for Genomics and Bioinformatics, University of Georgia
- 14,295 - - - - - - 14,295
Totals per type
310,349 14,295 288 112 112 640,019 3,904 30,819,855 31,788,934

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Equus caballus taxonomy/phylogenetic Animal Diversity Web
2 records from this provider taxonomy/phylogenetic AnimalBase
Equus caballus taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Equus caballus taxonomy/phylogenetic Barcodes of Life
Equus caballus taxonomy/phylogenetic CalPhotos
6 records from this provider supplemental materials Dryad Digital Repository
Equus caballus Linnaeus, 1758 taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Equus caballus Linnaeus, 1758 taxonomy/phylogenetic Integrated Taxonomic Information System
Equus caballus Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Equus caballus taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Equus caballus organism-specific WebScipio - eukaryotic gene identification
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Breeds of Livestock (Oklahoma State) taxdemo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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