Link to NCBI Front Page Taxonomy Logo
Entrez PubMed Nucleotide Protein Genome Structure PMC Taxonomy Books
   
Taxonomy browser (Canis lupus familiaris)

Canis lupus familiaris

Taxonomy ID: 9615 (for references in articles please use NCBI:txid9615)
Scientific name: Canis lupus familiaris
homotypic synonym: Canis familiaris
includes: beagle dog
includes: beagle dogs
Genbank common name: dog
Inherited blast name: carnivores
Rank: subspecies
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Canis canis
synonym: Canis domesticus
common name: dogs
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus
   Entrez records   
Database name Direct links
Nucleotide 318,925
Nucleotide EST 382,638
Nucleotide GSS 853,938
Protein 85,485
Structure 123
Genome 1
Popset 321
GEO Datasets 8,879
UniGene 23,847
PubMed Central 4,333
Gene 51,497
HomoloGene 17,434
SRA Experiments 6,639
GEO Profiles 205,497
Protein Clusters 13
Identical Protein Groups 58,416
Bio Project 434
Bio Sample 6,692
Bio Systems 1,984
Assembly 6
Clone DB 202,745
Probe 65,011
PubChem BioAssay 19,627
Taxonomy 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Canis lupus familiaris
Genome view: 40 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 X Y
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
CLONEEND FINISHING OTHER PCR PRIMERWALK SHOTGUN TRANSPOSON WGS ALL
ABC - Agencourt Bioscience Corporation
393,408 - - - - - - - 393,408
BI - Broad Insititute
- - 34,105 24,868 11,749 2,433,580 980,319 35,280,634 38,765,255
INDIVIDUAL - Direct submission from individual investigator
- - - 31 - - - - 31
NISC - NIH Intramural Sequencing Center
- - - - - 746,202 - - 746,202
TIGR - The Institute for Genome Research
183 - - - - - - 4,524,294 4,524,477
UOKNOR - University of Oklahoma Norman Campus, Advanced Center for Genome Technology
- 141 - - - 4,334 - - 4,475
Totals per type
393,591 141 34,105 24,899 11,749 3,184,116 980,319 39,804,928 44,433,848

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
2 records from this provider taxonomy/phylogenetic AnimalBase
2 records from this provider taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Canis familiaris taxonomy/phylogenetic Barcodes of Life
Canis familiaris taxonomy/phylogenetic CalPhotos
7 records from this provider supplemental materials Dryad Digital Repository
Canis lupus Linnaeus, 1758 taxonomy/phylogenetic Encyclopedia of life
5 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Canis lupus familiaris Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
dog (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
5 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

Show organism modifiers



Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


Comments and questions to info@ncbi.nlm.nih.gov

[Help] [Search] [NLM NIH] [Disclaimer]