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Taxonomy browser (Homo sapien)

Homo sapien

Taxonomy ID: 9606 (for references in articles please use NCBI:txid9606)
Scientific name: Homo sapien
synonym: Homo sapien
synonym: Homo sapien
synonym: Homo sapien
current: Homo sapiens
Genbank common name: human
Inherited blast name: primates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
common name: man
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo
   Entrez records   
Database name Subtree links Direct links
Nucleotide 16,640,459 16,640,408
Nucleotide EST 8,705,106 8,705,106
Nucleotide GSS 1,783,512 1,782,186
Protein 1,271,742 1,271,343
Structure 39,933 39,930
Genome 1 1
Popset 24,066 24,065
SNP 2,550 2,550
Conserved Domains 43 43
GEO Datasets 1,496,524 1,496,524
UniGene 130,056 130,056
PubMed Central 30,446 30,401
Gene 224,167 224,094
HomoloGene 18,713 18,713
SRA Experiments 1,191,956 1,191,394
GEO Profiles 61,958,910 61,958,910
Protein Clusters 13 13
Bio Project 44,884 44,863
Bio Sample 3,990,844 3,990,659
Bio Systems 3,077 3,077
Assembly 327 327
dbVar 5,227,847 5,215,908
Clone DB 17,630,348 17,630,348
Probe 27,382,519 27,382,519
PubChem BioAssay 359,100 359,092
Taxonomy 3 1

Genome Information

See the NCBI Genome homepage
Go to NCBI genomic BLAST page for Homo sapien
See the TRACE Assembly
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 CLONEEND EST FINISHING OTHER PCR PRIMERWALK RT-PCR SHOTGUN TRANSPOSON WCS WGS ALL
ABC - Agencourt Bioscience Corporation
- 1,419,974 547,865 - - 7,357,752 - - - - - 17,209,772 26,535,363
AGRF - Australian Genome Research Facility Ltd
- - - - - 19 - - - - - - 19
BCCAGSC - British Columbia Cancer Agency Genome Sciences Centre
- - - - - - - 90,063 - - - - 90,063
BCM - Baylor College of Medicine
- 72,841 - - - 11,898,749 - - 6,454,245 - 1,864,579 2,810,758 23,101,172
BGI - Beijing Genome Institute
- - - - - - - - 138,344 - - - 138,344
BI - Broad Insititute
1,503,135 - - - 513 10,028,266 96 - 117,315 40,960 - 8,311,898 20,002,183
BLUEHERON - Blue Heron Biotechnology, Inc
- - - - - - 3,495 - - - - - 3,495
CODON - Codon Devices
- - - - - - 6,344 - - - - - 6,344
CRA - Celera Genomics
- - - - - - - - - - - 27,449,655 27,449,655
CSHL - Cold Spring Harbor Laboratory
76,475,486 - - - - - - - - - - 6,989,618 83,465,104
CUHK - The Chinese University of Hong Kong
- - - - - 330 - - - - - - 330
FLJ - Human full-length cDNA sequencing projects (Japan)
- - 2,445,650 - - - - - - - - - 2,445,650
GENS - GenScript Corporation
- - - - - - 365 - - - - - 365
IMBGA - Institute of Molecular Biotechnology Genome Analysis
- 728 - - - - - 2 880,049 - - - 880,779
INCYTE - Incyte Genomics
- - 911,953 - - - - - - - - - 911,953
INDIVIDUAL - Direct submission from individual investigator
- - - - - 1,397 - 104 - - - - 1,501
JCVI - J. Craig Venter Institute
- 2,387,652 - - - 103,862 - - - - - 12,146,378 14,637,892
LMM - Partners: Laboratory of Molecular Medicine (PCPGM)
- - - - - 14,182 - - - - - - 14,182
MPI-EVA - Max Planck Institute for Evolutionary Anthropology
179,131 - - - - - - - - - - - 179,131
MPIMG - Max Planck Institute for Molecular Genetics
- - - - - - 73 - 2,942 - - - 3,015
NISC - NIH Intramural Sequencing Center
- - - - - 3,967,064 - - - - - - 3,967,064
PICO - Picoscript Ltd LLP
- - - - - - 1,631 - - - - - 1,631
SC - The Sanger Center
- 252,376 - - - 2,708 487,041 - 28,036,495 226,414 12,726,128 226,002 41,957,164
SHGC - Stanford Human Genome Center
- - - - - 511,690 - - - - - - 511,690
SYSU - Sun Yat-sen University
- - - - - 45 - - - - - - 45
TIGR - The Institute for Genome Research
- 3,530 - - - - 43 - - - - 77,389 80,962
UC-GENES - University of Chicago Clinical Molecular Genetics Laboratory
- - - - - 1,297 - - - - - - 1,297
UGALGB - Laboratory for Genomics and Bioinformatics, University of Georgia
- - 30,727 - - - - - - - - - 30,727
UIACBCB - University of Iowa Center for Bioinformatics and Computation Biology (UIACBCB)
- - 468,079 - - - - - - - - - 468,079
UOKNOR - University of Oklahoma Norman Campus, Advanced Center for Genome Technology
- - - 23,037 - - - - 313,271 - - - 336,308
UWGL - University of Washington, Green Laboratory (UWGL)
- - - - - - - 852 - - - - 852
UWNL - University of Washington, Nickerson Laboratory
- - - - - 3,512,305 - - - - - - 3,512,305
WU-LCG - Washington University Laboratory for Computational Genomics
- - - - - - - 4,411 - - - - 4,411
WUGSC - Washington University, Genome Sequencing Center
- 8,865,972 - 159 1,000 8,086,706 78,547 - 5,871,710 - 1,729,365 2,329 24,635,788
Totals per type
78,157,752 13,003,073 4,404,274 23,196 1,513 45,486,372 577,635 95,432 41,814,371 267,374 16,320,072 75,223,799 275,374,863

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Homo sapiens taxonomy/phylogenetic Animal Diversity Web
Homo sapiens LinnA%A6us, 1758 taxonomy/phylogenetic AnimalBase
Homo sapiens taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Homo sapiens taxonomy/phylogenetic Barcodes of Life
53 records from this provider supplemental materials Dryad Digital Repository
Homo sapiens Linnaeus, 1758 taxonomy/phylogenetic Encyclopedia of life
95 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
639332100: Homo sapiens organism-specific Integrated Microbial Genomes
Homo sapiens Linnaeus, 1758 taxonomy/phylogenetic Integrated Taxonomic Information System
6 records from this provider clones/clone libraries Kazusa DNA Research Institute
Homo sapiens taxonomy/phylogenetic Lifemap
Homo sapiens Linnaeus 1758 taxonomy/phylogenetic Mammal Species of the World
6 records from this provider taxonomy/phylogenetic NCBI taxonomy bookmarks
haploid hydatidiform male (BAC proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
ToL taxonomy/phylogenetic Tree of Life
Homo sapiens taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
30 records from this provider organism-specific diArk - a resource for eukaryotic genome research
2 records from provider taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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