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Taxonomy browser (Pan troglodytes)

Pan troglodytes

Taxonomy ID: 9598 (for references in articles please use NCBI:txid9598)
current name
Pan troglodytes
Genbank common name: chimpanzee
NCBI BLAST name: primates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( abbreviated )
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
   Entrez records   
Database name Subtree links Direct links
Nucleotide 705,070 456,291
Protein 235,940 230,677
Structure 18 18
Genome 1 1
Popset 20,870 20,849
Conserved Domains 3 3
GEO Datasets 4,776 4,759
PubMed Central 8,223 8,223
Gene 85,186 85,186
HomoloGene 18,385 18,385
SRA Experiments 22,023 20,758
GEO Profiles 67,300 67,300
Protein Clusters 13 13
Identical Protein Groups 134,170 133,479
BioProject 227 207
BioSample 13,728 12,851
Assembly 20 18
dbVar 28,550 11,652
PubChem BioAssay 146 146
Taxonomy 6 1

Comments and References:

image:Pan troglodytes

Genome Information

Go to NCBI genomic BLAST page for Pan troglodytes
Genome view: 25 chromosomes
Names 1 2A 2B 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pan troglodytes taxonomy/phylogenetic Animal Diversity Web
Pan troglodytes taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Pan troglodytes taxonomy/phylogenetic Barcodes of Life
CCR culture/stock collections Coriell Cell Repositories
2 records from this provider supplemental materials Dryad Digital Repository
Pan troglodytes (Blumenbach, 1775) taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Pan troglodytes (Blumenbach, 1775) taxonomy/phylogenetic Integrated Taxonomic Information System
Pan troglodytes Blumenbach 1775 taxonomy/phylogenetic Mammal Species of the World
3 records from this provider taxonomy/phylogenetic NHGRI genome proposal white papers
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Pan troglodytes (chimpanzee) taxonomy/phylogenetic Primate Fact Sheets
Pan troglodytes taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
WebScipio: Pan troglodytes organism-specific WebScipio - eukaryotic gene identification
diArk: Pan troglodytes organism-specific diArk - a resource for eukaryotic genome research
2 records from provider taxonomy/phylogenetic iPhylo
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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